Summary for ENCSR518BPP
doi:10.17989/ENCSR518BPP
Supersedes ENCSR903UWK
Summary
- Status
- released
- Description
- Reference epigenome for human CD14-positive monocyte
- Donor diversity
- composite
- Assay
- ChIP-seq, small RNA-seq, polyA plus RNA-seq, DNase-seq
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K27me3, H3K9me3, H3K4me3, CTCF
- Biosample summary
- Homo sapiens CD14-positive monocyte female
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR518BPP
Experiments
10 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR000ATN | ChIP-seq | CTCF | ENCDO265AAA | Homo sapiens CD14-positive monocyte female | Bradley Bernstein, Broad | released | |
| ENCSR000ASK | ChIP-seq | H3K27me3 | ENCDO265AAA | Homo sapiens CD14-positive monocyte female | Bradley Bernstein, Broad | released | |
| ENCSR000ASN | ChIP-seq | H3K4me3 | ENCDO265AAA | Homo sapiens CD14-positive monocyte female | Bradley Bernstein, Broad | released | |
| ENCSR000EPK | DNase-seq | ENCDO265AAA | Homo sapiens CD14-positive monocyte female | John Stamatoyannopoulos, UW | released | ||
| ENCSR000CUC | polyA plus RNA-seq | ENCDO266AAA, ENCDO265AAA | Homo sapiens CD14-positive monocyte female | Thomas Gingeras, CSHL | released | ||
| ENCSR000ASL | ChIP-seq | H3K36me3 | ENCDO265AAA | Homo sapiens CD14-positive monocyte female | Bradley Bernstein, Broad | released | |
| ENCSR000ASM | ChIP-seq | H3K4me1 | ENCDO265AAA | Homo sapiens CD14-positive monocyte female | Bradley Bernstein, Broad | released | |
| ENCSR000ASJ | ChIP-seq | H3K27ac | ENCDO265AAA | Homo sapiens CD14-positive monocyte female | Bradley Bernstein, Broad | released | |
| ENCSR000ASP | ChIP-seq | H3K9me3 | ENCDO265AAA | Homo sapiens CD14-positive monocyte female | Bradley Bernstein, Broad | released | |
| ENCSR000CVN | small RNA-seq | ENCDO266AAA, ENCDO265AAA | Homo sapiens CD14-positive monocyte female | Thomas Gingeras, CSHL | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR000AUU | input library | Homo sapiens CD14-positive monocyte female | Bradley Bernstein, Broad | released |