Summary for ENCSR493GDU

doi:10.17989/ENCSR493GDU

Summary

Status
released
Description
Reference epigenome for human testis (37 year old male)
Donor diversity
single
Assay
ChIP-seq, RNA-seq, small RNA-seq, whole-genome shotgun bisulfite sequencing, microRNA-seq, DNase-seq, ATAC-seq
Target
H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K27me3, H3K4me3, CTCF
Biosample summary
Homo sapiens testis tissue male adult (37 years)
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources
Tags
Visit collection page for ENTEx

Experiments in ENCSR493GDU

Experiments
13 experiments
Accession
Assay
Target
Biosample summary
Lab
Status
Cart
ENCSR029KNZRNA-seqHomo sapiens testis tissue male adult (37 years)Thomas Gingeras, CSHL
released
ENCSR136ZQZChIP-seqH3K27acHomo sapiens testis tissue male adult (37 years)Bradley Bernstein, Broad
released
ENCSR210NKBATAC-seqHomo sapiens testis tissue male adult (37 years)Michael Snyder, Stanford
released
ENCSR229WIWsmall RNA-seqHomo sapiens testis tissue male adult (37 years)Thomas Gingeras, CSHL
released
ENCSR376JOCChIP-seqH3K9me3Homo sapiens testis tissue male adult (37 years)Bradley Bernstein, Broad
released
ENCSR503QSXChIP-seqH3K27me3Homo sapiens testis tissue male adult (37 years)Bradley Bernstein, Broad
released
ENCSR561MYMChIP-seqH3K36me3Homo sapiens testis tissue male adult (37 years)Bradley Bernstein, Broad
released
ENCSR611DJQChIP-seqH3K4me3Homo sapiens testis tissue male adult (37 years)Bradley Bernstein, Broad
released
ENCSR753RMEChIP-seqCTCFHomo sapiens testis tissue male adult (37 years)Bradley Bernstein, Broad
released
ENCSR806NNGwhole-genome shotgun bisulfite sequencingHomo sapiens testis tissue male adult (37 years)Richard Myers, HAIB
released
ENCSR866ODXDNase-seqHomo sapiens testis tissue male adult (37 years)John Stamatoyannopoulos, UW
released
ENCSR915GVHmicroRNA-seqHomo sapiens testis tissue male adult (37 years)Ali Mortazavi, UCI
released
ENCSR956VQBChIP-seqH3K4me1Homo sapiens testis tissue male adult (37 years)Bradley Bernstein, Broad
released
Control experiments
1 control experiment
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR215WNNinput libraryHomo sapiens testis tissue male adult (37 years)Bradley Bernstein, Broad
released