Summary for ENCSR438IXZ

doi:10.17989/ENCSR438IXZ

Summary

Status
released
Description
Reference epigenome for mouse forebrain (15.5 day embryonic)
Donor diversity
single
Assay
whole-genome shotgun bisulfite sequencing, ATAC-seq, polyA plus RNA-seq, ChIP-seq, microRNA-seq
Target
H3K36me3, H3K4me3, H3K27ac, H3K9ac, H3K27me3, H3K9me3, H3K4me1, H3K4me2
Biosample summary
Mus musculus strain B6NCrl forebrain tissue embryo (15.5 days)
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources

Experiments in ENCSR438IXZ

Experiments
12 experiments
Accession
Assay
Target
Biosample summary
Lab
Status
Cart
ENCSR976LWPATAC-seqMus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Bing Ren, UCSD
released
ENCSR668BBXChIP-seqH3K9me3Mus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Bing Ren, UCSD
released
ENCSR019HJVwhole-genome shotgun bisulfite sequencingMus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Joe Ecker, Salk
released
ENCSR752RGNpolyA plus RNA-seqMus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Barbara Wold, Caltech
released
ENCSR437SFXChIP-seqH3K36me3Mus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Bing Ren, UCSD
released
ENCSR691NQHChIP-seqH3K27acMus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Bing Ren, UCSD
released
ENCSR564XSRChIP-seqH3K27me3Mus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Bing Ren, UCSD
released
ENCSR875KRKChIP-seqH3K4me1Mus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Bing Ren, UCSD
released
ENCSR022KDEChIP-seqH3K4me3Mus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Bing Ren, UCSD
released
ENCSR717XCUChIP-seqH3K9acMus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Bing Ren, UCSD
released
ENCSR402ZLEChIP-seqH3K4me2Mus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Bing Ren, UCSD
released
ENCSR758VDYmicroRNA-seqMus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Ali Mortazavi, UCI
released
Control experiments
1 control experiment
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR880HDVinput libraryMus musculus strain B6NCrl forebrain tissue embryo (15.5 days)Bing Ren, UCSD
released