Summary for ENCSR413GKJ
doi:10.17989/ENCSR413GKJ
Summary
- Status
- released
- Description
- REMC Epigenome (Class 2) for Ovary using donors/samples:STL002
- Donor diversity
- single
- Assay
- polyA plus RNA-seq, ChIP-seq, DNase-seq, whole-genome shotgun bisulfite sequencing
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K27me3, H3K4me3
- Biosample summary
- Homo sapiens ovary tissue female adult (30 years)
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E097
- External resources
Experiments in ENCSR413GKJ
Experiments
9 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|---|
ENCSR725TPW | polyA plus RNA-seq | Homo sapiens ovary tissue female adult (30 years) | Joe Ecker, Salk | released | ||
ENCSR417YFD | whole-genome shotgun bisulfite sequencing | Homo sapiens ovary tissue female adult (30 years) | Joe Ecker, Salk | released | ||
ENCSR139TLA | ChIP-seq | H3K4me3 | Homo sapiens ovary tissue female adult (30 years) | Bing Ren, UCSD | released | |
ENCSR268JQE | ChIP-seq | H3K27ac | Homo sapiens ovary tissue female adult (30 years) | Bing Ren, UCSD | released | |
ENCSR956UFV | ChIP-seq | H3K9me3 | Homo sapiens ovary tissue female adult (30 years) | Bing Ren, UCSD | released | |
ENCSR659MYS | ChIP-seq | H3K36me3 | Homo sapiens ovary tissue female adult (30 years) | Bing Ren, UCSD | released | |
ENCSR113AFY | ChIP-seq | H3K4me1 | Homo sapiens ovary tissue female adult (30 years) | Bing Ren, UCSD | released | |
ENCSR037SNV | ChIP-seq | H3K27me3 | Homo sapiens ovary tissue female adult (30 years) | Bing Ren, UCSD | released | |
ENCSR712PYJ | DNase-seq | Homo sapiens ovary tissue female adult (30 years) | John Stamatoyannopoulos, UW | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|
ENCSR818VNL | input library | Homo sapiens ovary tissue female adult (30 years) | Bing Ren, UCSD | released |