Summary for ENCSR403RCR
doi:10.17989/ENCSR403RCR
Summary
- Status
- released
- Description
- REMC Epigenome (Class 3) for Foreskin Fibroblast Primary Cells using donors/samples:skin02
- Donor diversity
- single
- Assay
- polyA plus RNA-seq, ChIP-seq, microRNA-seq, MRE-seq, MeDIP-seq, DNase-seq
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K27me3, H3K9me3, H3K4me3, Methylcytidine
- Biosample summary
- Homo sapiens foreskin fibroblast male newborn
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E056
- External resources
Experiments in ENCSR403RCR
Experiments
10 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|---|
ENCSR851GNB | polyA plus RNA-seq | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | ||
ENCSR941HTX | MRE-seq | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | archived | ||
ENCSR691NPI | MeDIP-seq | Methylcytidine | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | archived | |
ENCSR813CFB | ChIP-seq | H3K4me3 | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | |
ENCSR822ZIG | ChIP-seq | H3K27ac | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | |
ENCSR417IEJ | ChIP-seq | H3K27me3 | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | |
ENCSR251UPG | DNase-seq | Homo sapiens foreskin fibroblast male newborn | John Stamatoyannopoulos, UW | released | ||
ENCSR621EXD | ChIP-seq | H3K36me3 | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | |
ENCSR624YTO | ChIP-seq | H3K9me3 | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released | |
ENCSR367HVD | ChIP-seq | H3K4me1 | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|
ENCSR590YGY | input library | Homo sapiens foreskin fibroblast male newborn | Joseph Costello, UCSF | released |