Summary for ENCSR377TON
Superseded by ENCSR271ULX
Summary
- Status
- archived
- Description
- REMC Epigenome (ENCODE) for Adult Dermal Fibroblast Primary Cells using donors/samples:NHDF-Ad
- Donor diversity
- composite
- Assay
- ChIP-seq, RRBS, DNase-seq
- Target
- H3K9ac, H3K79me2, H4K20me1, H3K4me1, H3K27ac, H3K36me3, H3K27me3, H3K9me3, H3K4me3, H3K4me2, H2AFZ
- Biosample summary
- fibroblast of dermis primary cell, foreskin fibroblast primary cell
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E126
- External resources
- None submitted
Experiments in ENCSR377TON
Experiments
13 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR000ARX | ChIP-seq | H3K9me3 | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
| ENCSR000APP | ChIP-seq | H3K36me3 | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
| ENCSR000APO | ChIP-seq | H3K27me3 | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
| ENCSR000ARV | ChIP-seq | H3K4me1 | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
| ENCSR000APR | ChIP-seq | H3K4me3 | ENCDO267AAA, ENCDO759UVX | Homo sapiens fibroblast of dermis NONE and female adult | Bradley Bernstein, Broad | released | |
| ENCSR000APN | ChIP-seq | H3K27ac | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
| ENCSR000ARW | ChIP-seq | H3K79me2 | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
| ENCSR000EPO | DNase-seq | ENCDO267AAA | Homo sapiens fibroblast of dermis female adult | John Stamatoyannopoulos, UW | released | ||
| ENCSR000APQ | ChIP-seq | H3K4me2 | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
| ENCSR000ARJ | ChIP-seq | H4K20me1 | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
| ENCSR000ATG | ChIP-seq | H2AFZ | ENCDO759UVX, ENCDO267AAA | Homo sapiens fibroblast of dermis NONE and female adult | Bradley Bernstein, Broad | released | |
| ENCSR000APS | ChIP-seq | H3K9ac | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
| ENCSR000DFG | RRBS | ENCDO191CQJ | Homo sapiens foreskin fibroblast male newborn | Richard Myers, HAIB | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR000APT | input library | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released |