Summary for ENCSR343RKY
doi:10.17989/ENCSR343RKY
Summary
- Status
- released
- Description
- Reference Epigenome for mouse ES-Bruce4 cell line
- Donor diversity
- single
- Assay
- polyA plus RNA-seq, ChIP-seq
- Target
- H3K36me3, POLR2A, H3K4me3, CTCF, H3K27ac, H3K9ac, EP300, H3K27me3, H3K9me3, H3K4me1
- Biosample summary
- Mus musculus strain Bruce4 ES-Bruce4
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR343RKY
Experiments
11 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR000CCB | ChIP-seq | CTCF | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released | |
| ENCSR000CCC | ChIP-seq | POLR2A | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released | |
| ENCSR000CCD | ChIP-seq | EP300 | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released | |
| ENCSR000CFN | ChIP-seq | H3K27me3 | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released | |
| ENCSR000CFO | ChIP-seq | H3K36me3 | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released | |
| ENCSR000CFZ | ChIP-seq | H3K9me3 | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released | |
| ENCSR000CBF | ChIP-seq | H3K4me1 | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released | |
| ENCSR000CGS | ChIP-seq | H3K9ac | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released | |
| ENCSR000CBG | ChIP-seq | H3K4me3 | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released | |
| ENCSR000CDE | ChIP-seq | H3K27ac | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released | |
| ENCSR000CGU | polyA plus RNA-seq | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR000CBH | input library | Mus musculus strain Bruce4 ES-Bruce4 | Bing Ren, UCSD | released |