Summary for ENCSR339JWY

doi:10.17989/ENCSR339JWY

Supersedes ENCSR663TPA

Summary

Status
released
Description
Reference epigenome for human skeletal muscle myoblast
Donor diversity
composite
Assay
ChIP-seq, RNA-seq, polyA plus RNA-seq, whole-genome shotgun bisulfite sequencing, DNase-seq
Target
H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K27me3, H3K4me3, CTCF
Biosample summary
skeletal muscle myoblast primary cell
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources

Experiments in ENCSR339JWY

Experiments
11 experiments
Accession
Assay
Target
Donors
Biosample summary
Lab
Status
Cart
ENCSR444WHQRNA-seqENCDO094AAAHomo sapiens skeletal muscle myoblastThomas Gingeras, CSHL
released
ENCSR000ANEChIP-seqCTCFENCDO341XKYHomo sapiens skeletal muscle myoblast male adult (22 years)Bradley Bernstein, Broad
released
ENCSR000COYpolyA plus RNA-seqENCDO094AAAHomo sapiens skeletal muscle myoblastThomas Gingeras, CSHL
released
ENCSR000EOODNase-seqENCDO094AAAHomo sapiens skeletal muscle myoblastJohn Stamatoyannopoulos, UW
released
ENCSR000ANRChIP-seqH3K9me3ENCDO341XKYHomo sapiens skeletal muscle myoblast male adult (22 years)Bradley Bernstein, Broad
released
ENCSR000ANKChIP-seqH3K4me3ENCDO341XKYHomo sapiens skeletal muscle myoblast male adult (22 years)Bradley Bernstein, Broad
released
ENCSR000ANFChIP-seqH3K27acENCDO341XKYHomo sapiens skeletal muscle myoblast male adult (22 years)Bradley Bernstein, Broad
released
ENCSR000ANIChIP-seqH3K4me1ENCDO341XKYHomo sapiens skeletal muscle myoblast male adult (22 years)Bradley Bernstein, Broad
released
ENCSR000ANHChIP-seqH3K36me3ENCDO341XKYHomo sapiens skeletal muscle myoblast male adult (22 years)Bradley Bernstein, Broad
released
ENCSR000ANGChIP-seqH3K27me3ENCDO341XKYHomo sapiens skeletal muscle myoblast male adult (22 years)Bradley Bernstein, Broad
released
ENCSR328TBSwhole-genome shotgun bisulfite sequencingENCDO094AAAHomo sapiens skeletal muscle myoblastRichard Myers, HAIB
released
Control experiments
1 control experiment
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR000ANNinput libraryHomo sapiens skeletal muscle myoblast male adult (22 years)Bradley Bernstein, Broad
released