Summary for ENCSR320BIN
doi:10.17989/ENCSR320BIN
Summary
- Status
- released
- Description
- Reference epigenome for human body of pancreas (54 year old male)
- Donor diversity
- single
- Assay
- whole-genome shotgun bisulfite sequencing, DNase-seq, ATAC-seq, ChIP-seq, microRNA-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, POLR2A, CTCF, H3K9me3, H3K4me3
- Biosample summary
- Homo sapiens body of pancreas tissue male adult (54 years)
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR320BIN
Experiments
12 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|---|
ENCSR265PFQ | ChIP-seq | CTCF | Homo sapiens body of pancreas tissue male adult (54 years) | Michael Snyder, Stanford | released | |
ENCSR344YUA | whole-genome shotgun bisulfite sequencing | Homo sapiens body of pancreas tissue male adult (54 years) | Richard Myers, HAIB | released | ||
ENCSR348TQM | ChIP-seq | H3K4me1 | Homo sapiens body of pancreas tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
ENCSR517FVL | ChIP-seq | POLR2A | Homo sapiens body of pancreas tissue male adult (54 years) | Michael Snyder, Stanford | released | |
ENCSR523JCB | ChIP-seq | H3K36me3 | Homo sapiens body of pancreas tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
ENCSR554RQQ | ChIP-seq | H3K4me3 | Homo sapiens body of pancreas tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
ENCSR596PFU | ChIP-seq | H3K27ac | Homo sapiens body of pancreas tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
ENCSR723WQE | microRNA-seq | Homo sapiens body of pancreas tissue male adult (54 years) | Ali Mortazavi, UCI | released | ||
ENCSR765MXG | ATAC-seq | Homo sapiens body of pancreas tissue male adult (54 years) | Michael Snyder, Stanford | released | ||
ENCSR774CFO | ChIP-seq | H3K27me3 | Homo sapiens body of pancreas tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
ENCSR863TAL | ChIP-seq | H3K9me3 | Homo sapiens body of pancreas tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
ENCSR464TKV | DNase-seq | Homo sapiens body of pancreas tissue male adult (54 years) | John Stamatoyannopoulos, UW | released |
Control experiments
3 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|
ENCSR676WCI | input library | Homo sapiens body of pancreas tissue male adult (54 years) | Michael Snyder, Stanford | released | |
ENCSR099LGH | input library | Homo sapiens body of pancreas tissue male adult (54 years) | Bradley Bernstein, Broad | released | |
ENCSR079WBX | input library | Homo sapiens body of pancreas tissue male adult (54 years) | Michael Snyder, Stanford | released |