Summary for ENCSR273IZZ

doi:10.17989/ENCSR273IZZ

Summary

Status
released
Description
Reference epigenome for mouse neural tube (12.5 day embryonic)
Donor diversity
single
Assay
whole-genome shotgun bisulfite sequencing, ATAC-seq, polyA plus RNA-seq, ChIP-seq, microRNA-seq
Target
H3K36me3, H3K4me3, H3K27ac, H3K9ac, H3K27me3, H3K9me3, H3K4me1, H3K4me2
Biosample summary
Mus musculus strain B6NCrl neural tube tissue embryo (12.5 days)
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources

Experiments in ENCSR273IZZ

Experiments
12 experiments
Accession
Assay
Target
Biosample summary
Lab
Status
Cart
ENCSR690VOHATAC-seqMus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR107JRFmicroRNA-seqMus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Ali Mortazavi, UCI
released
ENCSR094QZCChIP-seqH3K36me3Mus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR930AFRChIP-seqH3K9me3Mus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR538SROChIP-seqH3K4me3Mus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR891SAWChIP-seqH3K27acMus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR375RUAChIP-seqH3K27me3Mus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR370MSKChIP-seqH3K4me2Mus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR263CKRChIP-seqH3K4me1Mus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR065CJCChIP-seqH3K9acMus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Bing Ren, UCSD
released
ENCSR144UTFwhole-genome shotgun bisulfite sequencingMus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Joe Ecker, Salk
released
ENCSR508GWZpolyA plus RNA-seqMus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Barbara Wold, Caltech
released
Control experiments
1 control experiment
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR991FSRinput libraryMus musculus strain B6NCrl neural tube tissue embryo (12.5 days)Bing Ren, UCSD
released