Summary for ENCSR271ULX
doi:10.17989/ENCSR271ULX
Supersedes ENCSR377TON
Summary
- Status
- released
- Description
- Reference epigenome for human fibroblast of dermis
- Donor diversity
- composite
- Assay
- ChIP-seq, RNA-seq, small RNA-seq, DNase-seq
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K27me3, H3K9me3, H3K4me3, CTCF
- Biosample summary
- fibroblast of dermis primary cell
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR271ULX
Experiments
10 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|---|---|
ENCSR000APM | ChIP-seq | CTCF | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
ENCSR000EPO | DNase-seq | ENCDO267AAA | Homo sapiens fibroblast of dermis female adult | John Stamatoyannopoulos, UW | released | ||
ENCSR000CUH | RNA-seq | ENCDO119AAA, ENCDO120AAA | Homo sapiens fibroblast of dermis female adult (44 years) and female adult (55 years) | Thomas Gingeras, CSHL | released | ||
ENCSR000ARX | ChIP-seq | H3K9me3 | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
ENCSR000APP | ChIP-seq | H3K36me3 | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
ENCSR000APO | ChIP-seq | H3K27me3 | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
ENCSR000ARV | ChIP-seq | H3K4me1 | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
ENCSR000APR | ChIP-seq | H3K4me3 | ENCDO267AAA, ENCDO759UVX | Homo sapiens fibroblast of dermis NONE and female adult | Bradley Bernstein, Broad | released | |
ENCSR000APN | ChIP-seq | H3K27ac | ENCDO759UVX | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released | |
ENCSR000CUY | small RNA-seq | ENCDO119AAA, ENCDO120AAA | Homo sapiens fibroblast of dermis female adult (44 years) and female adult (55 years) | Thomas Gingeras, CSHL | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|
ENCSR000APT | input library | Homo sapiens fibroblast of dermis | Bradley Bernstein, Broad | released |