Summary for ENCSR233CXK

doi:10.17989/ENCSR233CXK

Summary

Status
released
Description
Reference epigenome for human sigmoid colon (53 year old female)
Donor diversity
single
Assay
ChIP-seq, RNA-seq, small RNA-seq, DNase-seq, ATAC-seq
Target
POLR2AphosphoS5, H3K4me1, H3K27ac, H3K36me3, H3K9me3, EP300, POLR2A, H3K4me3, CTCF
Biosample summary
Homo sapiens sigmoid colon tissue female adult (53 years)
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources
Tags
Visit collection page for ENTEx

Experiments in ENCSR233CXK

Experiments
13 experiments
Accession
Assay
Target
Biosample summary
Lab
Status
Cart
ENCSR094GVZRNA-seqHomo sapiens sigmoid colon tissue female adult (53 years)Thomas Gingeras, CSHL
released
ENCSR150YAUChIP-seqH3K36me3Homo sapiens sigmoid colon tissue female adult (53 years)Bradley Bernstein, Broad
released
ENCSR268ZCFChIP-seqH3K27acHomo sapiens sigmoid colon tissue female adult (53 years)Bradley Bernstein, Broad
released
ENCSR313BMVChIP-seqEP300Homo sapiens sigmoid colon tissue female adult (53 years)Richard Myers, HAIB
released
ENCSR322JEOChIP-seqPOLR2AHomo sapiens sigmoid colon tissue female adult (53 years)Michael Snyder, Stanford
released
ENCSR403USEChIP-seqPOLR2AphosphoS5Homo sapiens sigmoid colon tissue female adult (53 years)Richard Myers, HAIB
released
ENCSR635SLBsmall RNA-seqHomo sapiens sigmoid colon tissue female adult (53 years)Thomas Gingeras, CSHL
released
ENCSR682GOIChIP-seqH3K9me3Homo sapiens sigmoid colon tissue female adult (53 years)Bradley Bernstein, Broad
released
ENCSR812POEChIP-seqH3K4me1Homo sapiens sigmoid colon tissue female adult (53 years)Bradley Bernstein, Broad
released
ENCSR846VLJATAC-seqHomo sapiens sigmoid colon tissue female adult (53 years)Michael Snyder, Stanford
released
ENCSR900UIPChIP-seqH3K4me3Homo sapiens sigmoid colon tissue female adult (53 years)Bradley Bernstein, Broad
released
ENCSR925GDSChIP-seqCTCFHomo sapiens sigmoid colon tissue female adult (53 years)Michael Snyder, Stanford
released
ENCSR276ITPDNase-seqHomo sapiens sigmoid colon tissue female adult (53 years)John Stamatoyannopoulos, UW
released
Control experiments
4 control experiments
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR844YMEinput libraryHomo sapiens sigmoid colon tissue female adult (53 years)Bradley Bernstein, Broad
released
ENCSR393DQEinput libraryHomo sapiens sigmoid colon tissue female adult (53 years)Richard Myers, HAIB
released
ENCSR747VNSinput libraryHomo sapiens sigmoid colon tissue female adult (53 years)Michael Snyder, Stanford
released
ENCSR481ZPBinput libraryHomo sapiens sigmoid colon tissue female adult (53 years)Richard Myers, HAIB
released