Summary for ENCSR215SBU
doi:10.17989/ENCSR215SBU
Summary
- Status
- released
- Description
- REMC Epigenome (Class 5) for Colon Smooth Muscle using donors/samples:156; 83_REMC_18
- Donor diversity
- composite
- Assay
- RRBS, ChIP-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, H3K9ac, H3K9me3, H3K4me3
- Biosample summary
- muscle layer of colon tissue
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E076
- External resources
- Tags
Experiments in ENCSR215SBU
Experiments
12 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR757GCN | RRBS | ENCDO731PNE | Homo sapiens muscle layer of colon tissue female adult (77 years) | Bradley Bernstein, Broad | archived | ||
| ENCSR576YAD | ChIP-seq | H3K9me3 | ENCDO266YSK | Homo sapiens muscle layer of colon tissue female adult (56 years) | Bradley Bernstein, Broad | released | |
| ENCSR170VSJ | ChIP-seq | H3K4me3 | ENCDO266YSK | Homo sapiens muscle layer of colon tissue female adult (56 years) | Bradley Bernstein, Broad | released | |
| ENCSR004EKY | ChIP-seq | H3K27ac | ENCDO266YSK | Homo sapiens muscle layer of colon tissue female adult (56 years) | Bradley Bernstein, Broad | released | |
| ENCSR858LJY | ChIP-seq | H3K27me3 | ENCDO266YSK | Homo sapiens muscle layer of colon tissue female adult (56 years) | Bradley Bernstein, Broad | released | |
| ENCSR011GVU | ChIP-seq | H3K36me3 | ENCDO266YSK | Homo sapiens muscle layer of colon tissue female adult (56 years) | Bradley Bernstein, Broad | released | |
| ENCSR381EFC | ChIP-seq | H3K27me3 | ENCDO731PNE | Homo sapiens muscle layer of colon tissue female adult (77 years) | Bradley Bernstein, Broad | released | |
| ENCSR943PIR | ChIP-seq | H3K4me3 | ENCDO731PNE | Homo sapiens muscle layer of colon tissue female adult (77 years) | Bradley Bernstein, Broad | released | |
| ENCSR385NUC | ChIP-seq | H3K4me1 | ENCDO731PNE | Homo sapiens muscle layer of colon tissue female adult (77 years) | Bradley Bernstein, Broad | released | |
| ENCSR756RGW | ChIP-seq | H3K9ac | ENCDO731PNE | Homo sapiens muscle layer of colon tissue female adult (77 years) | Bradley Bernstein, Broad | released | |
| ENCSR328CWP | ChIP-seq | H3K9me3 | ENCDO731PNE | Homo sapiens muscle layer of colon tissue female adult (77 years) | Bradley Bernstein, Broad | released | |
| ENCSR048JDL | ChIP-seq | H3K36me3 | ENCDO731PNE | Homo sapiens muscle layer of colon tissue female adult (77 years) | Bradley Bernstein, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR020OIW | input library | Homo sapiens muscle layer of colon tissue female adult (56 years) | Bradley Bernstein, Broad | released | |
| ENCSR806RVF | input library | Homo sapiens muscle layer of colon tissue female adult (77 years) | Bradley Bernstein, Broad | released |