Summary for ENCSR211RGU
doi:10.17989/ENCSR211RGU
Summary
- Status
- released
- Description
- Reference epigenome for human spleen (37 year old male)
- Donor diversity
- single
- Assay
- RNA-seq, small RNA-seq, whole-genome shotgun bisulfite sequencing, ChIP-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, POLR2AphosphoS5, H3K36me3, POLR2A, CTCF, H3K9me3, H3K4me3
- Biosample summary
- Homo sapiens spleen tissue male adult (37 years)
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR211RGU
Experiments
12 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR091IRL | ChIP-seq | H3K9me3 | Homo sapiens spleen tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR330UMQ | RNA-seq | Homo sapiens spleen tissue male adult (37 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR343RJH | ChIP-seq | CTCF | Homo sapiens spleen tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR407UEE | ChIP-seq | H3K36me3 | Homo sapiens spleen tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR426VHO | ChIP-seq | H3K27ac | Homo sapiens spleen tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR506DCR | ChIP-seq | H3K27me3 | Homo sapiens spleen tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR556QXD | ChIP-seq | H3K4me3 | Homo sapiens spleen tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR729GXE | ChIP-seq | POLR2A | Homo sapiens spleen tissue male adult (37 years) | Michael Snyder, Stanford | released | |
| ENCSR757JTX | whole-genome shotgun bisulfite sequencing | Homo sapiens spleen tissue male adult (37 years) | Richard Myers, HAIB | released | ||
| ENCSR917CQJ | small RNA-seq | Homo sapiens spleen tissue male adult (37 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR928BGP | ChIP-seq | H3K4me1 | Homo sapiens spleen tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR950CUQ | ChIP-seq | POLR2AphosphoS5 | Homo sapiens spleen tissue male adult (37 years) | Richard Myers, HAIB | released |
Control experiments
3 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR889RIF | input library | Homo sapiens spleen tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR895OZW | input library | Homo sapiens spleen tissue male adult (37 years) | Michael Snyder, Stanford | released | |
| ENCSR384HXX | input library | Homo sapiens spleen tissue male adult (37 years) | Richard Myers, HAIB | released |