Summary for ENCSR203RUV

doi:10.17989/ENCSR203RUV

Summary

Status
released
Description
Reference epigenome for mouse lung (0 day postnatal)
Donor diversity
composite
Assay
whole-genome shotgun bisulfite sequencing, DNase-seq, ATAC-seq, polyA plus RNA-seq, ChIP-seq, microRNA-seq
Target
H3K36me3, H3K4me3, CTCF, H3K27ac, H3K9ac, EP300, H3K27me3, H3K9me3, H3K4me1, H3K4me2
Biosample summary
B6NCrl lung tissue
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources

Experiments in ENCSR203RUV

Experiments
15 experiments
Accession
Assay
Target
Donors
Biosample summary
Lab
Status
Cart
ENCSR102NGDATAC-seqENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap lung tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR418SBYChIP-seqCTCFENCDO956IXVMus musculus strain B6NCrl lung tissue postnatal (0 days)Richard Myers, HAIB
released
ENCSR527DMEChIP-seqEP300ENCDO956IXVMus musculus strain B6NCrl lung tissue postnatal (0 days)Richard Myers, HAIB
released
ENCSR523IIHChIP-seqH3K4me1ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap lung tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR262CSUChIP-seqH3K4me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap lung tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR409HKJwhole-genome shotgun bisulfite sequencingENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap lung tissue postnatal (0 days)Joe Ecker, Salk
released
ENCSR238ZCJChIP-seqH3K9me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap lung tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR025AOCChIP-seqH3K27me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap lung tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR250LXHChIP-seqH3K36me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap lung tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR884MYDChIP-seqH3K27acENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap lung tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR340VNKChIP-seqH3K4me2ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap lung tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR356LBCChIP-seqH3K9acENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap lung tissue postnatal (0 days)Bing Ren, UCSD
released
ENCSR161PUTmicroRNA-seqENCDO956IXVMus musculus strain B6NCrl lung tissue postnatal (0 days)Ali Mortazavi, UCI
released
ENCSR982MRYpolyA plus RNA-seqENCDO956IXVMus musculus strain B6NCrl lung tissue postnatal (0 days)Barbara Wold, Caltech
released
ENCSR094XAYDNase-seqENCDO956IXVMus musculus strain B6NCrl lung tissue postnatal (0 days)John Stamatoyannopoulos, UW
released
Control experiments
3 control experiments
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR275BEGinput libraryMus musculus strain B6NCrl lung tissue postnatal (0 days)Richard Myers, HAIB
released
ENCSR227UFBinput libraryMus musculus strain B6NCrl lung tissue postnatal (0 days)Richard Myers, HAIB
released
ENCSR241RIGinput libraryMus musculus strain B6NTac;B6NCrl/Lap lung tissue postnatal (0 days)Bing Ren, UCSD
released