Summary for ENCSR200EJX
doi:10.17989/ENCSR200EJX
Summary
- Status
- released
- Description
- REMC Epigenome (Class 5) for Brain Anterior Caudate using donors/samples:112; 149
- Donor diversity
- composite
- Assay
- RRBS, ChIP-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, H3K4me3, H3K9me3, H3K9ac
- Biosample summary
- caudate nucleus tissue
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E068
- External resources
- Tags
Experiments in ENCSR200EJX
Experiments
15 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR556WAM | RRBS | ENCDO980BZD | Homo sapiens caudate nucleus tissue male adult (81 years) | Bradley Bernstein, Broad | archived | ||
| ENCSR539DOU | RRBS | ENCDO871IWW | Homo sapiens caudate nucleus tissue female adult (75 years) | Bradley Bernstein, Broad | archived | ||
| ENCSR399SJE | ChIP-seq | H3K36me3 | ENCDO871IWW | Homo sapiens caudate nucleus tissue female adult (75 years) | Bradley Bernstein, Broad | released | |
| ENCSR486QMV | ChIP-seq | H3K4me3 | ENCDO871IWW | Homo sapiens caudate nucleus tissue female adult (75 years) | Bradley Bernstein, Broad | released | |
| ENCSR209WQN | ChIP-seq | H3K27me3 | ENCDO871IWW | Homo sapiens caudate nucleus tissue female adult (75 years) | Bradley Bernstein, Broad | released | |
| ENCSR840KVX | ChIP-seq | H3K4me3 | ENCDO980BZD | Homo sapiens caudate nucleus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR552TQB | ChIP-seq | H3K9me3 | ENCDO871IWW | Homo sapiens caudate nucleus tissue female adult (75 years) | Bradley Bernstein, Broad | released | |
| ENCSR494OPF | ChIP-seq | H3K27me3 | ENCDO980BZD | Homo sapiens caudate nucleus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR672FMZ | ChIP-seq | H3K9ac | ENCDO871IWW | Homo sapiens caudate nucleus tissue female adult (75 years) | Bradley Bernstein, Broad | released | |
| ENCSR109NBJ | ChIP-seq | H3K9me3 | ENCDO980BZD | Homo sapiens caudate nucleus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR494MDB | ChIP-seq | H3K27ac | ENCDO980BZD | Homo sapiens caudate nucleus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR798RTU | ChIP-seq | H3K27ac | ENCDO871IWW | Homo sapiens caudate nucleus tissue female adult (75 years) | Bradley Bernstein, Broad | released | |
| ENCSR303OIB | ChIP-seq | H3K4me1 | ENCDO980BZD | Homo sapiens caudate nucleus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR893MHU | ChIP-seq | H3K36me3 | ENCDO980BZD | Homo sapiens caudate nucleus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR264YGM | ChIP-seq | H3K4me1 | ENCDO871IWW | Homo sapiens caudate nucleus tissue female adult (75 years) | Bradley Bernstein, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR314KMO | input library | Homo sapiens caudate nucleus tissue female adult (75 years) | Bradley Bernstein, Broad | released | |
| ENCSR831HVP | input library | Homo sapiens caudate nucleus tissue male adult (81 years) | Bradley Bernstein, Broad | released |