Summary for ENCSR172GTQ
doi:10.17989/ENCSR172GTQ
Summary
- Status
- released
- Description
- Reference epigenome for human thyroid gland (37 year old male)
- Donor diversity
- single
- Assay
- ChIP-seq, RNA-seq, whole-genome shotgun bisulfite sequencing, microRNA-seq, DNase-seq
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K27me3, H3K4me3, CTCF
- Biosample summary
- Homo sapiens thyroid gland tissue male adult (37 years)
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
- Tags
Experiments in ENCSR172GTQ
Experiments
11 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR225VCV | ChIP-seq | H3K36me3 | Homo sapiens thyroid gland tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR266EYO | ChIP-seq | H3K9me3 | Homo sapiens thyroid gland tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR281KFH | microRNA-seq | Homo sapiens thyroid gland tissue male adult (37 years) | Ali Mortazavi, UCI | released | ||
| ENCSR403DTW | whole-genome shotgun bisulfite sequencing | Homo sapiens thyroid gland tissue male adult (37 years) | Richard Myers, HAIB | released | ||
| ENCSR532LJV | RNA-seq | Homo sapiens thyroid gland tissue male adult (37 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR597BWL | ChIP-seq | H3K27ac | Homo sapiens thyroid gland tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR748LUA | ChIP-seq | H3K27me3 | Homo sapiens thyroid gland tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR901BRV | ChIP-seq | H3K4me3 | Homo sapiens thyroid gland tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR906YES | ChIP-seq | H3K4me1 | Homo sapiens thyroid gland tissue male adult (37 years) | Bradley Bernstein, Broad | released | |
| ENCSR749MUH | DNase-seq | Homo sapiens thyroid gland tissue male adult (37 years) | John Stamatoyannopoulos, UW | released | ||
| ENCSR505ZGX | ChIP-seq | CTCF | Homo sapiens thyroid gland tissue male adult (37 years) | Bradley Bernstein, Broad | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR777VQP | input library | Homo sapiens thyroid gland tissue male adult (37 years) | Bradley Bernstein, Broad | released |