Summary for ENCSR135QJF
doi:10.17989/ENCSR135QJF
Summary
- Status
- released
- Description
- Reference epigenome for human NCI-H929 cell line
- Donor diversity
- single
- Assay
- ChIP-seq, DNase-seq, ATAC-seq
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K27me3, H3K9me3, H3K4me3, CTCF
- Biosample summary
- Homo sapiens NCI-H929
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR135QJF
Experiments
9 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR728YXC | ChIP-seq | H3K9me3 | Homo sapiens NCI-H929 | Michael Snyder, Stanford | released | |
| ENCSR382LBS | ATAC-seq | Homo sapiens NCI-H929 | Michael Snyder, Stanford | released | ||
| ENCSR634OAQ | ChIP-seq | CTCF | Homo sapiens NCI-H929 | Bradley Bernstein, Broad | released | |
| ENCSR011CSR | ChIP-seq | H3K4me1 | Homo sapiens NCI-H929 | Bradley Bernstein, Broad | released | |
| ENCSR359BGB | ChIP-seq | H3K27me3 | Homo sapiens NCI-H929 | Michael Snyder, Stanford | released | |
| ENCSR082NQB | ChIP-seq | H3K4me3 | Homo sapiens NCI-H929 | Bradley Bernstein, Broad | released | |
| ENCSR368CYW | ChIP-seq | H3K27ac | Homo sapiens NCI-H929 | Michael Snyder, Stanford | released | |
| ENCSR562JTY | ChIP-seq | H3K36me3 | Homo sapiens NCI-H929 | Bradley Bernstein, Broad | released | |
| ENCSR090SMP | DNase-seq | Homo sapiens NCI-H929 | John Stamatoyannopoulos, UW | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR698TWO | input library | Homo sapiens NCI-H929 | Michael Snyder, Stanford | released | |
| ENCSR409FGC | input library | Homo sapiens NCI-H929 | Bradley Bernstein, Broad | released |