Summary for ENCSR114GMF
doi:10.17989/ENCSR114GMF
Summary
- Status
- released
- Description
- REMC Epigenome (Class 2) for Brain Hippocampus Middle using donors/samples:149;150
- Donor diversity
- composite
- Assay
- polyA plus RNA-seq, whole-genome shotgun bisulfite sequencing, ChIP-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K4me3
- Biosample summary
- layer of hippocampus tissue
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E071
- External resources
- Tags
Experiments in ENCSR114GMF
Experiments
16 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR656WDA | polyA plus RNA-seq | ENCDO636RDE | Homo sapiens layer of hippocampus tissue male adult (73 years) | Bradley Bernstein, Broad | archived | ||
| ENCSR239GFM | polyA plus RNA-seq | ENCDO980BZD | Homo sapiens layer of hippocampus tissue male adult (81 years) | Bradley Bernstein, Broad | released | ||
| ENCSR936PWM | whole-genome shotgun bisulfite sequencing | ENCDO980BZD | Homo sapiens layer of hippocampus tissue male adult (81 years) | Bradley Bernstein, Broad | archived | ||
| ENCSR511FJA | whole-genome shotgun bisulfite sequencing | ENCDO636RDE | Homo sapiens layer of hippocampus tissue male adult (73 years) | Bradley Bernstein, Broad | archived | ||
| ENCSR956CFX | ChIP-seq | H3K4me3 | ENCDO980BZD | Homo sapiens layer of hippocampus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR797IXN | ChIP-seq | H3K4me1 | ENCDO636RDE | Homo sapiens layer of hippocampus tissue male adult (73 years) | Bradley Bernstein, Broad | released | |
| ENCSR383AEO | ChIP-seq | H3K4me3 | ENCDO636RDE | Homo sapiens layer of hippocampus tissue male adult (73 years) | Bradley Bernstein, Broad | released | |
| ENCSR126FJY | ChIP-seq | H3K36me3 | ENCDO980BZD | Homo sapiens layer of hippocampus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR912TVO | ChIP-seq | H3K27ac | ENCDO980BZD | Homo sapiens layer of hippocampus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR953HJN | ChIP-seq | H3K9me3 | ENCDO980BZD | Homo sapiens layer of hippocampus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR713HJS | ChIP-seq | H3K27me3 | ENCDO980BZD | Homo sapiens layer of hippocampus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR040TUS | ChIP-seq | H3K4me1 | ENCDO980BZD | Homo sapiens layer of hippocampus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR691IZA | ChIP-seq | H3K36me3 | ENCDO636RDE | Homo sapiens layer of hippocampus tissue male adult (73 years) | Bradley Bernstein, Broad | released | |
| ENCSR085KRD | ChIP-seq | H3K9me3 | ENCDO636RDE | Homo sapiens layer of hippocampus tissue male adult (73 years) | Bradley Bernstein, Broad | released | |
| ENCSR321LKT | ChIP-seq | H3K27ac | ENCDO636RDE | Homo sapiens layer of hippocampus tissue male adult (73 years) | Bradley Bernstein, Broad | released | |
| ENCSR076STK | ChIP-seq | H3K27me3 | ENCDO636RDE | Homo sapiens layer of hippocampus tissue male adult (73 years) | Bradley Bernstein, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR193TCX | input library | Homo sapiens layer of hippocampus tissue male adult (81 years) | Bradley Bernstein, Broad | released | |
| ENCSR416ESX | input library | Homo sapiens layer of hippocampus tissue male adult (73 years) | Bradley Bernstein, Broad | released |