Summary for ENCSR046MDU
doi:10.17989/ENCSR046MDU
Summary
- Status
- released
- Description
- REMC Epigenome (Class 3) for Fetal Kidney using donors/samples:H-22676
- Donor diversity
- composite
- Assay
- RRBS, transcription profiling by array assay, ChIP-seq, DNase-seq
- Target
- H3K27me3, H3K4me1, H3K36me3, H3K9ac, H3K9me3, H3K4me3
- Biosample summary
- kidney tissue
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E086
- External resources
Experiments in ENCSR046MDU
Experiments
9 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR442DRK | transcription profiling by array assay | Homo sapiens kidney tissue female embryo (120 days) | John Stamatoyannopoulos, UW | archived | ||
| ENCSR365NOY | RRBS | Homo sapiens kidney tissue female embryo (120 days) | Bradley Bernstein, Broad | archived | ||
| ENCSR761KZV | ChIP-seq | H3K27me3 | Homo sapiens kidney tissue female embryo (120 days) | Bradley Bernstein, Broad | released | |
| ENCSR459GCS | ChIP-seq | H3K4me1 | Homo sapiens kidney tissue female embryo (120 days) | Bradley Bernstein, Broad | released | |
| ENCSR366AOJ | ChIP-seq | H3K36me3 | Homo sapiens kidney tissue female embryo (120 days) | Bradley Bernstein, Broad | released | |
| ENCSR533DRE | ChIP-seq | H3K9me3 | Homo sapiens kidney tissue female embryo (120 days) | Bradley Bernstein, Broad | released | |
| ENCSR096EZX | ChIP-seq | H3K4me3 | Homo sapiens kidney tissue female embryo (120 days) | Bradley Bernstein, Broad | released | |
| ENCSR106OKX | DNase-seq | Homo sapiens kidney tissue female embryo (120 days) | John Stamatoyannopoulos, UW | released | ||
| ENCSR317MKR | ChIP-seq | H3K9ac | Homo sapiens kidney tissue female embryo (120 days) | Bradley Bernstein, Broad | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR241FEX | input library | Homo sapiens kidney tissue female embryo (117 days) | Bradley Bernstein, Broad | released |