Summary for ENCSR043WJN
Superseded by ENCSR068MRQ
Summary
- Status
- archived
- Description
- REMC Epigenome (ENCODE) for Cervical Carcinoma Cell Line using donors/samples:HeLa-S3
- Donor diversity
- single
- Assay
- ChIP-seq, RRBS, polyA plus RNA-seq, DNase-seq
- Target
- H3K9ac, H3K79me2, H4K20me1, H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K27me3, H3K4me3, H3K4me2, H2AFZ
- Biosample summary
- HeLa-S3 cell line
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E117
- External resources
- None submitted
Experiments in ENCSR043WJN
Experiments
14 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR000AOF | ChIP-seq | H3K4me3 | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released | |
| ENCSR000AOC | ChIP-seq | H3K27ac | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released | |
| ENCSR000APW | ChIP-seq | H3K4me1 | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released | |
| ENCSR000AQO | ChIP-seq | H3K9me3 | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released | |
| ENCSR000APB | ChIP-seq | H3K27me3 | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released | |
| ENCSR000AOD | ChIP-seq | H3K36me3 | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released | |
| ENCSR000AOH | ChIP-seq | H3K9ac | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released | |
| ENCSR000AOE | ChIP-seq | H3K4me2 | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released | |
| ENCSR000AOI | ChIP-seq | H4K20me1 | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released | |
| ENCSR000AQN | ChIP-seq | H2AFZ | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released | |
| ENCSR000AOG | ChIP-seq | H3K79me2 | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released | |
| ENCSR000DFL | RRBS | Homo sapiens HeLa-S3 | Richard Myers, HAIB | released | ||
| ENCSR000ENO | DNase-seq | Homo sapiens HeLa-S3 G1b phase | John Stamatoyannopoulos, UW | released | ||
| ENCSR000CPR | polyA plus RNA-seq | Homo sapiens HeLa-S3 | Thomas Gingeras, CSHL | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR000AOB | input library | Homo sapiens HeLa-S3 | Bradley Bernstein, Broad | released |