Summary for ENCSR026SJT

doi:10.17989/ENCSR026SJT

Summary

Status
released
Description
Reference epigenome for mouse intestine (14.5 day embryonic)
Donor diversity
composite
Assay
whole-genome shotgun bisulfite sequencing, DNase-seq, ATAC-seq, polyA plus RNA-seq, ChIP-seq, microRNA-seq
Target
H3K36me3, H3K4me3, H3K27ac, H3K9ac, H3K9me3, H3K27me3, H3K4me1, H3K4me2
Biosample summary
B6NCrl intestine tissue
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources

Experiments in ENCSR026SJT

Experiments
13 experiments
Accession
Assay
Target
Donors
Biosample summary
Lab
Status
Cart
ENCSR014YAYChIP-seqH3K27me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap intestine tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR089FFKwhole-genome shotgun bisulfite sequencingENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap intestine tissue embryo (14.5 days)Joe Ecker, Salk
released
ENCSR150EOOATAC-seqENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap intestine tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR157LYRChIP-seqH3K4me1ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap intestine tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR260OUPChIP-seqH3K9acENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap intestine tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR424ENDChIP-seqH3K27acENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap intestine tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR464MQUChIP-seqH3K4me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap intestine tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR485GTYChIP-seqH3K4me2ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap intestine tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR580VUWmicroRNA-seqENCDO956IXVMus musculus strain B6NCrl intestine tissue embryo (14.5 days)Ali Mortazavi, UCI
released
ENCSR698WCJChIP-seqH3K9me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap intestine tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR932TRUpolyA plus RNA-seqENCDO956IXVMus musculus strain B6NCrl intestine tissue embryo (14.5 days)Barbara Wold, Caltech
released
ENCSR953KTYChIP-seqH3K36me3ENCDO469XMJMus musculus strain B6NTac;B6NCrl/Lap intestine tissue embryo (14.5 days)Bing Ren, UCSD
released
ENCSR655WKXDNase-seqENCDO956IXVMus musculus strain B6NCrl intestine tissue embryo (14.5 days)John Stamatoyannopoulos, UW
released
Control experiments
1 control experiment
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR645QSYinput libraryMus musculus strain B6NTac;B6NCrl/Lap intestine tissue embryo (14.5 days)Bing Ren, UCSD
released