Summary for ENCSR020SIU
doi:10.17989/ENCSR020SIU
Summary
- Status
- released
- Description
- REMC Epigenome (Class 2) for Fetal Intestine Large using donors/samples:H-24595; H-23769
- Donor diversity
- composite
- Assay
- whole-genome shotgun bisulfite sequencing, DNase-seq, ChIP-seq, polyA plus RNA-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K4me3
- Biosample summary
- Homo sapiens large intestine tissue male embryo (108 days)
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- ROADMAP (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E084
- External resources
Experiments in ENCSR020SIU
Experiments
9 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR462KQY | whole-genome shotgun bisulfite sequencing | ENCDO132ASK | Homo sapiens large intestine tissue male embryo (108 days) | John Stamatoyannopoulos, UW | released | ||
| ENCSR066FZL | polyA plus RNA-seq | ENCDO132ASK | Homo sapiens large intestine tissue male embryo (108 days) | John Stamatoyannopoulos, UW | released | ||
| ENCSR413QXO | ChIP-seq | H3K4me3 | ENCDO119ASK | Homo sapiens large intestine tissue male embryo (108 days) | John Stamatoyannopoulos, UW | released | |
| ENCSR998ZWM | ChIP-seq | H3K4me1 | ENCDO119ASK | Homo sapiens large intestine tissue male embryo (108 days) | John Stamatoyannopoulos, UW | released | |
| ENCSR659RHV | ChIP-seq | H3K27ac | ENCDO119ASK | Homo sapiens large intestine tissue male embryo (108 days) | John Stamatoyannopoulos, UW | released | |
| ENCSR530LYV | ChIP-seq | H3K36me3 | ENCDO119ASK | Homo sapiens large intestine tissue male embryo (108 days) | John Stamatoyannopoulos, UW | released | |
| ENCSR857AEB | DNase-seq | ENCDO132ASK | Homo sapiens large intestine tissue male embryo (108 days) | John Stamatoyannopoulos, UW | released | ||
| ENCSR591JZS | ChIP-seq | H3K9me3 | ENCDO119ASK | Homo sapiens large intestine tissue male embryo (108 days) | John Stamatoyannopoulos, UW | released | |
| ENCSR157FDN | ChIP-seq | H3K27me3 | ENCDO119ASK | Homo sapiens large intestine tissue male embryo (108 days) | John Stamatoyannopoulos, UW | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR107RQX | input library | Homo sapiens large intestine tissue male embryo (108 days) | John Stamatoyannopoulos, UW | released |