Summary for ENCSR015MPL
doi:10.17989/ENCSR015MPL
Summary
- Status
- released
- Description
- REMC Epigenome (Class 2) for Right Ventricle using donors/samples:STL001;STL003
- Donor diversity
- composite
- Assay
- polyA plus RNA-seq, whole-genome shotgun bisulfite sequencing, ChIP-seq
- Target
- H3K27me3, H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K4me3
- Biosample summary
- heart right ventricle tissue
- Diseases
- Not reported
Attribution
Roadmap Epigenomics Mapping Consortium
- Lab
- Anshul Kundaje, Stanford
- Award
- U01DA025956 (Roadmap Epigenomics, Baylor)
- Project
- Roadmap
- Aliases
- roadmap-epigenomics:E105
- External resources
Experiments in ENCSR015MPL
Experiments
12 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR433XCV | polyA plus RNA-seq | ENCDO058AAA | Homo sapiens heart right ventricle tissue male adult (34 years) | Joe Ecker, Salk | released | ||
| ENCSR439SPU | polyA plus RNA-seq | ENCDO478OMA | Homo sapiens heart right ventricle tissue male child (3 years) | Joe Ecker, Salk | released | ||
| ENCSR626YZN | whole-genome shotgun bisulfite sequencing | ENCDO058AAA | Homo sapiens heart right ventricle tissue male adult (34 years) | Joe Ecker, Salk | released | ||
| ENCSR442IUA | whole-genome shotgun bisulfite sequencing | ENCDO478OMA | Homo sapiens heart right ventricle tissue male child (3 years) | Joe Ecker, Salk | released | ||
| ENCSR028NXO | ChIP-seq | H3K27ac | ENCDO478OMA | Homo sapiens heart right ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR076CZA | ChIP-seq | H3K4me1 | ENCDO058AAA | Homo sapiens heart right ventricle tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR023ALV | ChIP-seq | H3K4me1 | ENCDO478OMA | Homo sapiens heart right ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR142OBQ | ChIP-seq | H3K36me3 | ENCDO058AAA | Homo sapiens heart right ventricle tissue male adult (34 years) | Bing Ren, UCSD | released | |
| ENCSR616VTK | ChIP-seq | H3K36me3 | ENCDO478OMA | Homo sapiens heart right ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR086JMA | ChIP-seq | H3K9me3 | ENCDO478OMA | Homo sapiens heart right ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR676LPF | ChIP-seq | H3K27me3 | ENCDO478OMA | Homo sapiens heart right ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR107RDP | ChIP-seq | H3K4me3 | ENCDO478OMA | Homo sapiens heart right ventricle tissue male child (3 years) | Bing Ren, UCSD | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR592KRF | input library | Homo sapiens heart right ventricle tissue male child (3 years) | Bing Ren, UCSD | released | |
| ENCSR049LCN | input library | Homo sapiens heart right ventricle tissue male adult (34 years) | Bing Ren, UCSD | released |