Summary for ENCSR000FYQ

doi:10.17989/ENCSR000FYQ

Summary

Status
released
Description
REMC Epigenome (Class 2) for Liver using donors/samples:3; 4; 5
Donor diversity
composite
Assay
whole-genome shotgun bisulfite sequencing, ChIP-seq, polyA plus RNA-seq
Target
H3K27me3, H3K4me1, H3K27ac, H3K36me3, H3K4me3, H3K9me3, H3K9ac
Biosample summary
liver tissue
Diseases
Not reported

Attribution

Roadmap Epigenomics Mapping Consortium
Lab
Anshul Kundaje, Stanford
Award
U01DA025956 (Roadmap Epigenomics, Baylor)
Project
Roadmap
Aliases
roadmap-epigenomics:E066
External resources
Tags
Search for all ReferenceEpigenome with internal tag ccre_inputv1

Experiments in ENCSR000FYQ

Experiments
21 experiments
Accession
Assay
Target
Donors
Biosample summary
Lab
Status
Cart
ENCSR191ZHLwhole-genome shotgun bisulfite sequencingENCDO832GKPHomo sapiens liver tissue male adult (31 years)Bradley Bernstein, Broad
archived
ENCSR020YHOwhole-genome shotgun bisulfite sequencingENCDO776UMNHomo sapiens liver tissue female adult (25 years)Bradley Bernstein, Broad
archived
ENCSR241SMWpolyA plus RNA-seqENCDO832GKPHomo sapiens liver tissue male adult (31 years)Bradley Bernstein, Broad
archived
ENCSR203RKZChIP-seqH3K4me1ENCDO232KQVHomo sapiens liver tissue male adult (78 years)Bradley Bernstein, Broad
released
ENCSR642HIIChIP-seqH3K4me1ENCDO776UMNHomo sapiens liver tissue female adult (25 years)Bradley Bernstein, Broad
released
ENCSR853JYBChIP-seqH3K9me3ENCDO776UMNHomo sapiens liver tissue female adult (25 years)Bradley Bernstein, Broad
released
ENCSR489RQVChIP-seqH3K9me3ENCDO232KQVHomo sapiens liver tissue male adult (78 years)Bradley Bernstein, Broad
released
ENCSR111OHTChIP-seqH3K4me1ENCDO832GKPHomo sapiens liver tissue male adult (31 years)Bradley Bernstein, Broad
released
ENCSR213DKSChIP-seqH3K36me3ENCDO776UMNHomo sapiens liver tissue female adult (25 years)Bradley Bernstein, Broad
released
ENCSR682MXXChIP-seqH3K9acENCDO776UMNHomo sapiens liver tissue female adult (25 years)Bradley Bernstein, Broad
released
ENCSR021BCUChIP-seqH3K9acENCDO832GKPHomo sapiens liver tissue male adult (31 years)Bradley Bernstein, Broad
released
ENCSR275DXOChIP-seqH3K27me3ENCDO232KQVHomo sapiens liver tissue male adult (78 years)Bradley Bernstein, Broad
released
ENCSR458WIHChIP-seqH3K4me3ENCDO832GKPHomo sapiens liver tissue male adult (31 years)Bradley Bernstein, Broad
released
ENCSR678LNDChIP-seqH3K27acENCDO776UMNHomo sapiens liver tissue female adult (25 years)Bradley Bernstein, Broad
released
ENCSR351DLFChIP-seqH3K9me3ENCDO832GKPHomo sapiens liver tissue male adult (31 years)Bradley Bernstein, Broad
released
ENCSR460RHNChIP-seqH3K36me3ENCDO832GKPHomo sapiens liver tissue male adult (31 years)Bradley Bernstein, Broad
released
ENCSR904LILChIP-seqH3K27me3ENCDO776UMNHomo sapiens liver tissue female adult (25 years)Bradley Bernstein, Broad
released
ENCSR230IMSChIP-seqH3K27acENCDO832GKPHomo sapiens liver tissue male adult (31 years)Bradley Bernstein, Broad
released
ENCSR585KLQChIP-seqH3K36me3ENCDO232KQVHomo sapiens liver tissue male adult (78 years)Bradley Bernstein, Broad
released
ENCSR520BUXChIP-seqH3K4me3ENCDO232KQVHomo sapiens liver tissue male adult (78 years)Bradley Bernstein, Broad
released
ENCSR803JYIChIP-seqH3K4me3ENCDO776UMNHomo sapiens liver tissue female adult (25 years)Bradley Bernstein, Broad
released
Control experiments
3 control experiments
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR942ZROinput libraryHomo sapiens liver tissue male adult (78 years)Bradley Bernstein, Broad
released
ENCSR236NLUinput libraryHomo sapiens liver tissue female adult (25 years)Bradley Bernstein, Broad
released
ENCSR687HYOinput libraryHomo sapiens liver tissue male adult (31 years)Bradley Bernstein, Broad
released