Histone ChIP-seq (unreplicated)

  • Status: active
Title
Histone ChIP-seq (unreplicated)
Assays
ChIP-seq
Description
ENCODE analysis pipeline for unreplicated histone ChIP-seq. The pipeline takes as inputs both ChIP-seq reads (from paired-end or single-end libraries) and a set of reference fastas found at https://www.encodeproject.org/data-standards/reference-sequences/. The reference used depends on the assembly.
Lab
ENCODE Processing Pipeline
Award PI
J. Michael Cherry, Stanford

Pipeline schematic