News
Data release: 114 human and 98 mouse datasets
December 17, 2014
Includes ChIP-seq, RNA-seq, WGBS, and more
Updates to publications using ENCODE data
December 1, 2014
The publication page at the ENCODE Portal has been updated to include the supplemental sites
Data release: 88 human and 11 mouse datasets
November 20, 2014
We are pleased to announce that the following datasets have been released on the ENCODE Portal:
Mouse ENCODE Consortium papers published
November 19, 2014
Recent findings from the mouse ENCODE Consortium are now published
Create custom track hubs from a search result
November 19, 2014
Data from a search results of assays can now be visualized at the UCSC Genome Browser.
Data release: 85 human datasets
October 16, 2014
All shRNA knockdown followed by RNA-seq assays
First version of the ENCODE genomics annotations
October 16, 2014
The set of annotations includes an expression matrix, transcription start sites, etc.
Antibody pages updated
October 9, 2014
New features on the page include a listing of all cell types, in any species, that have been characterized using the antibody lot, etc.
Data release: 13 human and 3 mouse datasets
September 29, 2014
All 16 datasets come from RNA-seq
Data release: 23 human and 5 mouse datasets
September 12, 2014
These datasets are from ChIP-seq, iCLIP, RAMPAGE, RNA-seq, and WGBS assays
modENCODE and ENCODE comparison papers published
August 28, 2014
Publications comparing expression, regulatory features, and chromatin structure between fly, worm, and human
New ENCODE portal released
August 19, 2014
We are pleased to announce the release of the new ENCODE portal
Data Release from ENCODE: 760 experiments of ChIP-seq, RNA-seq, ChIA-Pet and 3 new assay types in human and mouse
July 14, 2014
The ENCODE Data Coordination Center is pleased to announce the first public release of data from the third phase of ENCODE.
Visualize tracks on the UCSC Genome Browser via track-hubs-on-the-fly
June 16, 2014
The ability to visualize tracks at the UCSC Genome Browser via track hubs has been released
Antibody characterization standard updated
March 24, 2014
The updated antibody characterization document is available
Updated data release policy
March 24, 2014
Community may freely download, analyze and publish results based on any ENCODE data without restrictions as soon as they are released.
ENCODE data with expanded metadata released on new DCC portal
February 13, 2014
The metadata associated with biosamples and assays have been mapped to ontologies.