News

June 2018 Data Release

July 3, 2018

60 new datasets from modERN

April/May 2018 Data Release

June 1, 2018

63 datasets released since March!

March 2018 Data Release

April 2, 2018

134 datasets released this March! (122 from ChIP-seq; 12 from WGBS)

Data Release from December 2017, January 2018, and February 2018!

March 2, 2018

469 new datasets total from December, January, and February.

"Prevention of data duplication for high throughput sequencing repositories" published!

March 1, 2018

ENCODE DCC's paper regarding our challenges and solutions to unintended duplications has been published in Database.

November 2017 Data Release Overview

December 1, 2017

428 new datasets released this November!

"The Encyclopedia of DNA elements (ENCODE): data portal update" published!

November 7, 2017

ENCODE DCC's paper regarding our portal has been published in Nucleic Acids Research.

October 2017 Data Release Overview

November 1, 2017

200 newly released datasets from ENCODE and GGR!

September 2017 Data Release Overview

October 5, 2017

116 released datasets!

August 2017 Data Release Overview

September 1, 2017

46 from the ENCODE3 phase, 25 from the new ENCODE4 phase

ENCODE Pipelines in Synapse!

August 14, 2017

We have our first ever non-DCC, validated run of an ENCODE pipeline!

July 2017 Data Release Overview

August 7, 2017

39 new datasets have been released this July!

May and June 2017 Data Release Overview

June 9, 2017

338 new experiments: 310 human datasets, and 28 mouse datasets

"SnoVault" paper published!

April 13, 2017

ENCODE DCC's paper on its software system has recently been published on PLOS one.

February and March 2017 Data Release Overview

April 4, 2017

135 new datasets from February; 94 datasets from March

Data Release: 32 new datasets from the Leslie Lab

March 7, 2017

The Leslie Lab, under the GGR Project, has released 32 Mouse datasets.

January 2017 Data Release Overview

February 3, 2017

393 new datasets were released in the month of January

Data Release: 66 new dendritic cell datasets from the Garber Lab

January 20, 2017

We are pleased to announce that the Garber Lab, under the GGR project, has released 66 new dendritic cell datasets.

Data Release: 86 Drosophila ChIP-seq data

January 11, 2017

We are pleased to announce that the modERN project has released 86 new Drosophila ChIP-seq data.

December releases: 48 ChIP-seq from the Reddy Lab

December 21, 2016

We are pleased to announce that the Reddy Lab has released 48 new ChIP-seq experiments.

Regarding new eCLIP processed data

December 7, 2016

The Yeo Lab and the ENCODE DCC have released new eCLIP processed files.

November 2016 Data Release Overview

December 1, 2016

405 new datasets released this November, ranging from ChIP-seq, Hi-C, DNase-seq, RNA-seq, to siRNA knockdowns

ENCODE Users Meeting presentations

November 7, 2016

ENCODE Users Meeting 2016 presentations are on youtube.

New Submitter Login

November 4, 2016

The ENCODE DCC has updated the submitter login processes, due to Persona closing down. Please contact encode-help@lists.stanford.edu if you need assistance.

October 2016 release: 380 new ENCODE experiments

November 2, 2016

380 ENCODE experiments were released this October, 495 total including from GGR and modERN.