News

"SnoVault" paper published!

April 13, 2017

ENCODE DCC's paper on its software system has recently been published on PLOS one.

February and March 2017 Data Release Overview

April 4, 2017

135 new datasets from February; 94 datasets from March

Data Release: 32 new datasets from the Leslie Lab

March 7, 2017

The Leslie Lab, under the GGR Project, has released 32 Mouse datasets.

January 2017 Data Release Overview

February 3, 2017

393 new datasets were released in the month of January

Data Release: 66 new dendritic cell datasets from the Garber Lab

January 20, 2017

We are pleased to announce that the Garber Lab, under the GGR project, has released 66 new dendritic cell datasets.

Data Release: 86 Drosophila ChIP-seq data

January 11, 2017

We are pleased to announce that the modERN project has released 86 new Drosophila ChIP-seq data.

December releases: 48 ChIP-seq from the Reddy Lab

December 21, 2016

We are pleased to announce that the Reddy Lab has released 48 new ChIP-seq experiments.

Regarding new eCLIP processed data

December 7, 2016

The Yeo Lab and the ENCODE DCC have released new eCLIP processed files.

November 2016 Data Release Overview

December 1, 2016

405 new datasets released this November, ranging from ChIP-seq, Hi-C, DNase-seq, RNA-seq, to siRNA knockdowns

ENCODE Users Meeting presentations

November 7, 2016

ENCODE Users Meeting 2016 presentations are on youtube.

New Submitter Login

November 4, 2016

The ENCODE DCC has updated the submitter login processes, due to Persona closing down. Please contact encode-help@lists.stanford.edu if you need assistance.

October 2016 release: 380 new ENCODE experiments

November 2, 2016

380 ENCODE experiments were released this October, 495 total including from GGR and modERN.

72 GGR ChIP-seq from the Reddy Lab released!

October 28, 2016

72 ChIP-seq experiments from the Reddy Lab (Genomics of Gene Regulation project) have been released to the public.

104 ChIP-seq from Snyder Lab datasets released

October 10, 2016

A total of 104 ChIP-seq HEK293 experiments from the Snyder lab have been released!

127 ENCODE experiments released in the month of September!

October 3, 2016

Includes ChIP-seq, eCLIP, DNase-seq data, and more

81 new modERN ChIP-seq experiments released

September 30, 2016

modERN ChIP-seq datasets from fly and worm

More annotation file sets released

August 25, 2016

111 Annotation File Sets of promoter-like and enhancer-like regions have been released

336 Annotation File Sets Released!

August 3, 2016

With collaborations from the DAC (Data Analysis Center), a total of 336 Annotation File Sets of promoter-like and enhancer-like regions have been released.

42 mouse ChIP-seq released

July 20, 2016

Mouse e10.5 ChIP-seq datasets

Data release: 367 modERN datasets

July 6, 2016

367 modERN ChIP-seq datasets have just been released in the ENCODE portal, both from fly and worm

182 new datasets were released this June

June 29, 2016

Includes ChIP-seq, ATAC-seq, RNA-seq data, and more

50 more modERN experiments

May 24, 2016

Totaling to 198 modERN experiments released in May

First Hi-C data for the ENCODE Project

May 13, 2016

12 Hi-C experiments have been released from the Dekker lab

First release of modERN data on ENCODE

May 10, 2016

We are proud to announce the release of 39 modERN (model organism encyclopedia of regulatory networks) ChIP-seq datasets

First release of Genomics of Gene Regulation data on ENCODE

May 5, 2016

RNA-seq and DNase-seq treatment time series from the Reddy lab