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Experiment matrix

Enter search terms to filter the experiments included in the matrix.

Assay
  • genotyping array
    63
Assay category
  • Genotyping
    63
Date released
  • August, 2011
    63
Available data
  • fastq
    13825
  • bam
    12994
  • bigWig
    11889
  • bed narrowPeak
    7475
  • bigBed narrowPeak
    7467
  • bed broadPeak
    2417
  • tsv
    2339
  • bigBed broadPeak
    1963
  • tagAlign
    1272
  • bed bed3+
    886
  • tar
    579
  • sra
    496
  • bed bedRnaElements
    288
  • bigBed bedRnaElements
    288
  • bed bedMethyl
    277
  • bigBed bedMethyl
    277
  • idat
    275
  • gtf
    269
  • bed tss_peak
    235
  • bigBed tss_peak
    235
  • gff gff3
    235
  • bed idr_peak
    134
  • bigBed idr_peak
    134
  • bed bed6+
    115
  • bigBed bed6+
    115
  • rcc
    115
  • bed bedLogR
    64
  • bigBed bedLogR
    63
  • sam
    59
  • wig
    59
  • bed bed12
    43
  • bigBed bed12
    43
  • bed bedGraph
    30
  • bed bedExonScore
    27
  • bigBed bedExonScore
    27
  • csfasta
    24
  • hdf5
    20
  • bed bed9
    18
  • bigBed bed9
    18
  • hic
    17
  • bigBed bed3+
    13
  • csqual
    12
  • vcf
    12
  • bed peptideMapping
    8
  • bigBed peptideMapping
    8
  • bed bed3
    7
  • bigBed bed3
    7
  • bed modPepMap
    6
  • bed pepMap
    6
  • bedpe
    6
  • bigBed modPepMap
    6
  • bigBed pepMap
    6
  • CEL
    4
  • fasta
    3
Experiment status
  • released
    63
Organism
  • Homo sapiens
    63
Biosample type
  • cell line
    35
  • primary cell
    24
  • tissue
    3
  • in vitro differentiated cells
    1
Organ
  • epithelium
    16
  • blood
    8
  • bodily fluid
    8
  • lung
    6
  • mammary gland
    5
  • musculature of body
    5
  • brain
    4
  • connective tissue
    4
  • kidney
    4
  • extraembryonic component
    3
  • intestine
    3
  • skin of body
    3
  • vasculature
    3
  • blood vessel
    2
  • bronchus
    2
  • eye
    2
  • gonad
    2
  • heart
    2
  • penis
    2
  • prostate gland
    2
  • small intestine
    2
  • uterus
    2
  • arterial blood vessel
    1
  • embryo
    1
  • esophagus
    1
  • large intestine
    1
  • liver
    1
  • ovary
    1
  • pancreas
    1
  • placenta
    1
  • testis
    1
  • vein
    1
Cell
  • epithelial cell
    24
  • cancer cell
    15
  • fibroblast
    6
  • neural cell
    4
  • B cell
    3
  • cardiocyte
    2
  • endothelial cell
    1
  • lymphoblast
    1
  • melanocyte
    1
  • myoblast
    1
  • neuroblastoma cell
    1
  • smooth muscle cell
    1
  • stem cell
    1
Project
  • ENCODE
    63
Genome assembly
  • hg19
    63
Lab
  • Richard Myers, HAIB
    63
month_released!
  • September, 2015
BIOSAMPLE
ASSAY

63 results

Clear Filters
genotyping array
cell line
MCF 10A2
A5491
AG044491
AG044501
AG093091
primary cell
astrocyte2
bronchial epithelial cell2
amniotic epithelial cell1
aortic smooth muscle cell1
cardiac fibroblast1
tissue
chorion1
jejunum1
small intestine1
in vitro differentiated cells
myotube1
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