Experiment matrix

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BIOSAMPLE

	ASSAY
6157 results Clear Filters	ChIP-seq	shRNA RNA-seq	eCLIP	DNase-seq	polyA RNA-seq	siRNA RNA-seq	small RNA-seq	total RNA-seq	RNA microarray	Repli-seq	DNAme array	CRISPRi RNA-seq	genotyping array	RRBS	CAGE	ChIA-PET	CRISPR RNA-seq	genetic modification DNase-seq	RIP-seq	Hi-C	...and 21 more
cell line
K562	669	268	245	10	19	50	7	11	10	6	3	77	2	1	9	9	31	46	8	1
HepG2	357	255	210	3	11		3	5	6	6	3		2	2	6	1	19			1
A549	374			14	27		9		2	2	2		2	1	3					6
GM12878	226			2	13		6	2	7	6	3		2	2	6	2			7	7
HEK293	257								1		2		2	2
MCF-7	186			8	4	2	7		7	6	2		2	5	3	4
H1-hESC	146			3	9		4	1	1		2		1	1	4
HeLa-S3	101			4	5		3		4	6	2		2	1	6	1				1
SK-N-SH	71			2	5		10		1	6	3		2	2	4
IMR-90	55			2	3		9	2		6	2		2	1	3					1
MEL cell line	75			3	4			2
S2-DRSC	6			1	1	59	8	1							1
CH12.LX	57			1	1			2												1
HCT116	50			1	1				1		2			1		1
H9	37			7					1							1
S2R+					3		6	1											30
Ishikawa	27			4	4						1			1
G1E-ER4	23			1	7			2
GM23338	25			1	1		1	1			1
Panc1	21			1	1				1		3		3	2						1
GM23248	16			1	1		1	1			1		1
Kc167	10				2		8	6							2
ML-DmBG3-c2					1		8	12							4
MCF 10A	16			3							3		3	2
T47D	11			3	4					2	1		1	2						1
GM12891	14			1	1				1		2		1	1		2
SK-N-MC	14			1					1	2	2		1	1						1
HEK293T	20			1					1
BJ	5			1	1		1		1	6	1		1	1	1
GM12892	12			1	1						2		1	1		2
LNCaP clone FGC	5			3					3		2		2	3						1
OCI-LY7	13			1			1	1			1		1
PC-3	17			1				1
H7-hESC	10			2				1	2		1		1
AG04450	6			1	1		1		1		3		2	1	1
GM06990	5			1					1	6	1		1	1
MM.1S	17			1
NT2/D1	10			1					1		2		2	2
PC-9	17			1
C2C12	16				1
ES-E14	15			1				1
G1E	11			1	2			2
Karpas-422	13			1			1	1
OCI-LY1	16
DND-41	15
DOHH2	15
Loucy	15
NCI-H460				2	2		2	1		2	1		1							1
SU-DHL-6	15
HL-60	8			1					1		1		1	1
NB4	7			1					1		1		2	1		1
OCI-LY3	14
PFSK-1	8				1						2		2	1
SK-MEL-5				2	2		2	1			1		1							1
SK-N-DZ				2	2		2	1			1		1							1
ES-Bruce4	11				1
HT1080				1	2		1	1			1		1
HUES64	9				2
KMS-11	12
ML-DmD17-c3					6			6
AG09319	3			1					1		3		2	1
Caco-2	5			1					1		1		1	1
GM19239	1			1							1		1	1		5
A673	9			1
BE2C	3			1	1				1		2		1	1
CME-W1-Cl.8+					1		8	1
NCI-H929	10
iPS DF 19.11	8			1
iPS DF 6.9	8			1
iPS-20b	10
AG04449	3			1					1		2		1	1
AG09309	3			1					1		2		1	1
AG10803	3			1					1		2		1	1
E14TG2a.4	9
GM19240	1			1					1					1		5
HUES48	9
HUES6	9
Jurkat clone E61	2			1	1				1		1		1	1		1
UCSF-4	7				1
WI38	5			2					2
ACC112	8
CMK				1					1		3		2	1
GM12801	2									6
iPS-15b	8
iPS-18a	8
BG02										6
Caki2				1				1		2	1		1							1
G401				1				1		2	1		1							1
GM19238	1			1					1							4
SJCRH30				2				1			1		1							1
U-87 MG	1				1						2		2	1
22Rv1	6
C4-2B	4					2
GM12812										6
GM12813										6
H54	3			1					1
LNCAP	3									2						1
RPMI-7951				1				1			1		1							1
urothelium cell line				2					2
A172				1				1			1		1
D721Med	2			1					1
Daoy				1				1			1		1
ES-I3	5
GM12864	3			1					1
GM12865	3			1					1
H4				1				1			1		1
HFF-Myc	3			1					1
HTR-8/SVneo				1					1				1	1
KOPT-K1	5
M059J				1				1			1		1
RWPE1	4			1
SJSA1				1				1			1		1
WERI-Rb-1	3			1					1
GM10847	4
GM15510	4
GM18505	4
GM18526	4
GM18951	4
GM19099	4
GM19193	4
HT-29				1			1	1
LHCN-M2				1	1			1
A375							1	1
GM03348				3
GM08714	3
GM10248	2			1
GM10266	2			1
GM12875	3
GM13976	2			1
GM13977	2			1
GM18507				1					1
GM20000	2			1
HGPS cell									1		1			1
MG63				1				1					1
OVCAR3											1		1	1
Patski				1	1															1
RWPE2	3
SH-SY5Y	3
VCaP	3
ZHBTc4-mESC				3
hTERT-HM									1				1	1
iPS-18c	3
1182-4H					1			1
416B				1	1
8988T				1					1
A20				1	1
ACHN				1																1
AG08395				1					1
AG08396				1					1
AG08470									1					1
AG20443				1					1
C3H10T1/2					2
CME-L1					1			1
CME-W2					1			1
COLO829				1					1
CWRU1				1					1
GM12866	2
GM12872	2
GM12873	2
GM12874	2
GM2					1			1
HPDE6-E6E7				1					1
HuH-7				1					1
HuH-7.5				1					1
ML-DmBG1-c1					1			1
ML-DmBG2-c2					1			1
ML-DmD11					1			1
ML-DmD16-c3					1			1
ML-DmD20-c5					1			1
ML-DmD21					1			1
ML-DmD32					1			1
ML-DmD4-c1					1			1
ML-DmD8					1			1
ML-DmD9					1			1
MN1				2
NAMALWA				2
NIH3T3				1	1
R1				2
RCC 7860				1
Raji	2
S1					1			1
S3					1			1
Sg4					1			1
THP-1																				2
UCH-1									1					1
WW6				2
iPS-11a	2
iPS-NIHi11				1					1
iPS-NIHi7				1					1
mbn2					1			1
3134				1
3T3-L1				1
46C
A204.1
ARPE-19																1
BG01
C0202
CyT49
D341Med				1
DLD1																				1
DU 145																1
EH				1
EL				1
ELF-1				1
ELR				1
ES-CJ7				1
ES-D3
G401.6
GM04503				1
GM04504				1
GM06999
GM12867	1
GM12868	1
GM12869	1
GM12870	1
GM12871	1
GM20431																				1
HAP-1				1
HCEC 1CT				1
HFFc6				1
HK-2				1
HS-27A				1
HS-5				1
HT-1197																1
HT-1376																1
J185a
K1																1
KBM-7				1
KU-19-19																1
L-1210 cell
L1-S8				1
L1-S8R				1
LoVo				1
MEL-GATA-1-ER				1
ML-DmD20-c2								1
MSLCL																1
MSiPS																1
Mel-2183									1
NC-NC
NCI-H1437																1
NCI-H226				1
OSC					1
OSS					1
RKO				1
RPMI8226				1
SU-DHL-2																1
SU-DHL-4																1
SW480				1
TT2
TTC549
fGS/OSS					1
hFib2-iPS4
hTERT-HME1																1
iPS DF 19.7				1
iPS DF 4.7				1
iPS-5
mouse embryonic stem cell																				1
renal cell carcinoma				1