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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1WGBS
Assay category
  • 1DNA methylation
  • 1DNA sequencing
Date released
  • 1July, 2013
Available data
  • 1bam
  • 1bed bedMethyl
  • 1bigBed bedMethyl
  • 1bigWig
  • 1fastq
Organism
  • 1Homo sapiens
Biosample type
  • 1stem cell
Project
  • 1Roadmap
Genome assembly (visualization)
  • 1GRCh38
Audit category:
  • 1insufficient read length
Audit category:
  • 2781low read length
  • 2377mild to moderate bottlenecking
  • 1798low read depth
  • 1068moderate library complexity
  • 945inconsistent platforms
  • 828inconsistent control read length
  • 730control low read depth
  • 560antibody characterized with exemption
  • 467mixed read lengths
  • 382insufficient read depth
  • 335borderline replicate concordance
  • 306missing external identifiers
  • 241inconsistent target of control experiment
  • 165low spot score
  • 148mixed run types
  • 128inconsistent control run_type
  • 110missing spikeins
  • 89low replicate concordance
  • 89missing genotype
  • 9missing tag construct
  • 1high lambda C methylation ratio
BIOSAMPLE
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