Experiment matrix

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BIOSAMPLE

	ASSAY
12173 results Clear Filters	ChIP-seq	DNase-seq	polyA RNA-seq	shRNA RNA-seq	total RNA-seq	eCLIP	DNAme array	small RNA-seq	WGBS	microRNA-seq	ATAC-seq	RNA microarray	RAMPAGE	RNA Bind-n-Seq	genotyping array	CAGE	microRNA counts	siRNA RNA-seq	Repli-seq	RRBS	...and 25 more
cell line
K562	479	10	19	268	11	245	3	7	1	2		10	1		2	9	1	50	6	1
HepG2	223	3	11	255	5	210	3	3	2			6			2	6	1		6	2
A549	354	14	27				2	9	1		5	2			2	3			2	1
GM12878	174	2	13		3		3	6	1	1		7	1		2	6	1		6	2
MCF-7	146	8	4				2	7		1		7			2	3	1	2	6	5

tissue
liver	131	14	20		3		1	1	9	7	7		2				7			1
stomach	92	21	15		5		3	4	10	4	6		5				4			1
heart	79	21	16		3			1	10	9	7		2				8
lung	70	16	11		1		2	1	7	4	4		1				4			1
kidney	61	15	13				2		5	4	4						4			1

primary cell
bone marrow-derived macrophage			14		78
foreskin keratinocyte	35	2	5		3					3	13		13
endothelial cell of umbilical vein	27	2	5				1	1				2			1	5	1		6
keratinocyte	18	2	5					3				6				5			6
common myeloid progenitor, CD34-positive	29	12	1						1

whole organisms
whole organism	979		60		50											15
carcass			8		4											4
in vitro differentiated cells
dendritic cell	11				25						30
neural stem progenitor cell	22	1	2					1	2
mesenchymal stem cell	21	1	2					1	1
bipolar neuron	19	1	1		1		1	1		1							1
smooth muscle cell	14		1		1		1	1	2	1			1		1		1

cell-free sample
cell-free sample														158
single cell
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