Experiment matrix

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BIOSAMPLE

	ASSAY
10586 results Clear Filters	ChIP-seq	polyA RNA-seq	shRNA RNA-seq	total RNA-seq	eCLIP	DNAme array	small RNA-seq	WGBS	microRNA-seq	ATAC-seq	RNA microarray	RAMPAGE	RNA Bind-n-Seq	genotyping array	CAGE	microRNA counts	siRNA RNA-seq	Repli-seq	RRBS	CRISPRi RNA-seq	...and 24 more
cell line
K562	451	19	268	11	245	3	7	1	2		10	1		2	9	1	50	6	1	77
HepG2	201	11	255	5	210	3	3	2			6			2	6	1		6	2
A549	287	27				2	9	1		5	2			2	3			2	1
HEK293	242					2					1			2					2
GM12878	114	13		3		3	6	1	1		7	1		2	6	1		6	2

tissue
liver	96	20		3		1	1	9	7	7		2				7			1
stomach	67	15		5		3	4	10	4	6		5				4			1
heart	44	16		3			1	10	9	7		2				8
transverse colon	48			4		4	4	2		4		4		4
forebrain	42	8		1				8	9	7						8

whole organisms
whole organism	1879	60		50											15
carcass		8		4											4
primary cell
bone marrow-derived macrophage		14		78
foreskin keratinocyte	37	5		3					3	13		13
neurosphere	31	3							8
peripheral blood mononuclear cell	30	2							3
endothelial cell of umbilical vein	6	5				1	1				2			1	5	1		6

in vitro differentiated cells
dendritic cell	11			25						30
myocyte	25	2		1					1							1
bipolar neuron	23	1		1		1	1		1							1
hepatocyte	16	1		1		1	1	1	1			1				1
neural progenitor cell	16			1		1	1		1			1				1

cell-free sample
cell-free sample													158
single cell
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