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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
microRNA-seq
1
polyA mRNA RNA-seq
Assay category
68
Transcription
Date released
68
July, 2013
Organism
68
Homo sapiens
Biosample type
35
primary cell
29
tissue
4
stem cell
Organ
15
extraembryonic component
11
penis
8
embryonic structure
7
skin of body
6
mammary gland
5
brain
3
blood
3
connective tissue
3
placenta
2
pancreas
1
liver
Project
68
Roadmap
Audit category:
1472
insufficient read depth
880
control insufficient read depth
624
missing controlled_by
481
insufficient read length
310
unreplicated experiment
224
poor library complexity
213
severe bottlenecking
203
control low read depth
120
insufficient spot score
111
partially characterized antibody
83
missing possible_controls
68
missing RNA fragment size
49
missing documents
47
insufficient replicate concordance
27
antibody not characterized to standard
26
uncharacterized antibody
10
missing spikeins
2
insufficient coverage
2
missing input control
Audit category:
1
inconsistent platforms
BIOSAMPLE
ASSAY
68 results
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microRNA-seq
polyA mRNA RNA-seq
primary cell
foreskin melanocyte
5
cortex derived neurospheres
4
ganglionic eminence derived neurospheres
4
foreskin fibroblast
3
foreskin keratinocyte
3
+ See 10 more…
tissue
chorion
4
chorionic villus
4
amnion
3
placenta
3
trophoblast
3
+ See 9 more…
stem cell
mammary stem cell
2
H1-hESC
1
UCSF-4
1
See all biosamples