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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 496ChIP-seq
  • 106total RNA-seq
Assay category
  • 496DNA binding
  • 106Transcription
Target of assay
  • 248control
  • 248recombinant protein
  • 248transcription factor
Date released
  • 364July, 2016
  • 106March, 2014
  • 86January, 2017
  • 46September, 2016
Available data
  • 602bigWig
  • 602fastq
  • 595bam
  • 248bed narrowPeak
  • 248bigBed narrowPeak
Organism
  • 602Drosophila melanogaster
Biosample type
  • 537whole organisms
  • 40immortalized cell line
  • 25tissue
Organ
  • 3adipose tissue
  • 3connective tissue
  • 3gonad
  • 2mouth
  • 2ovary
  • 1testis
Project
  • 496modERN
  • 106modENCODE
Genome assembly (visualization)
  • 5863hg19
  • 5455GRCh38
  • 1482mm10
  • 602dm3
  • 496dm6
  • 350mm9
  • 282ce10
  • 280ce11
  • 2mm10-minimal
Audit category:
  • 8insufficient read depth
  • 1poor library complexity
  • 1severe bottlenecking
Audit category:
  • 105missing external identifiers
  • 67mild to moderate bottlenecking
  • 13moderate library complexity
  • 7missing genotype
  • 3borderline replicate concordance
  • 3inconsistent platforms
BIOSAMPLE
ASSAY

602 results

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ChIP-seq
total RNA-seq
whole organisms
whole organism49637
carcass4
immortalized cell line
ML-DmBG3-c212
Kc1676
1182-4H1
CME-L11
CME-W1-Cl.8+1
tissue
head9
digestive system4
arthropod fat body3
central nervous system2
ovary2
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