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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
496
ChIP-seq
106
total RNA-seq
Assay category
496
DNA binding
106
Transcription
Target of assay
248
control
248
recombinant protein
248
transcription factor
Date released
364
July, 2016
106
March, 2014
86
January, 2017
46
September, 2016
Available data
602
bigWig
602
fastq
595
bam
248
bed narrowPeak
248
bigBed narrowPeak
Organism
602
Drosophila melanogaster
Biosample type
537
whole organisms
40
immortalized cell line
25
tissue
Organ
3
adipose tissue
3
connective tissue
3
gonad
2
mouth
2
ovary
1
testis
Project
496
modERN
106
modENCODE
Genome assembly (visualization)
5863
hg19
5455
GRCh38
1482
mm10
602
dm3
496
dm6
350
mm9
282
ce10
280
ce11
2
mm10-minimal
Audit category:
8
insufficient read depth
1
poor library complexity
1
severe bottlenecking
Audit category:
105
missing external identifiers
67
mild to moderate bottlenecking
13
moderate library complexity
7
missing genotype
3
borderline replicate concordance
3
inconsistent platforms
BIOSAMPLE
ASSAY
602 results
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ChIP-seq
total RNA-seq
whole organisms
whole organism
496
37
carcass
4
immortalized cell line
ML-DmBG3-c2
12
Kc167
6
1182-4H
1
CME-L1
1
CME-W1-Cl.8+
1
+ See 19 more…
tissue
head
9
digestive system
4
arthropod fat body
3
central nervous system
2
ovary
2
+ See 4 more…
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