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Experiment matrix

Enter search terms to filter the experiments included in the matrix.

Assay
  • ChIP-seq
    3754
  • shRNA RNA-seq
    86
  • CRISPRi RNA-seq
    72
  • eCLIP
    51
  • ChIA-PET
    47
  • siRNA RNA-seq
    36
  • RIP-seq
    23
  • RNA Bind-n-Seq
    18
  • CRISPR RNA-seq
    13
  • iCLIP
    2
Assay category
  • Transcription
    86
Target of assay
  • RNA binding protein
    478
  • transcription factor
    86
  • control
    55
Date released
  • October, 2014
    22
  • November, 2014
    15
  • March, 2016
    10
  • August, 2015
    9
  • December, 2014
    6
  • February, 2016
    5
  • June, 2014
    5
  • September, 2016
    5
  • June, 2016
    3
  • January, 2016
    2
  • January, 2017
    2
  • August, 2016
    1
  • December, 2017
    1
Available data
  • bam
    86
  • bigWig
    86
  • fastq
    86
  • tsv
    86
  • tar
    75
Experiment status
  • released
    83
  • archived
    3
Organism
  • Homo sapiens
    86
Biosample type
  • cell line
    86
Organ
  • blood
    43
  • bodily fluid
    43
  • liver
    43
Cell
  • cancer cell
    86
  • epithelial cell
    43
Project
  • ENCODE
    86
Genome assembly
  • GRCh38
    83
  • hg19
    83
Lab
  • Brenton Graveley, UConn
    86
BIOSAMPLE
ASSAY

86 results

Clear Filters
shRNA RNA-seq
cell line
HepG243
K56243
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