ENCODE
    • Matrix
    • Search
    • Summary
    • Search by region
    • Reference epigenomes
    • Publications
    • About
    • Visualize (SCREEN)
    • Matrix
    • Search
    • Methods
    • Antibodies
    • Biosamples
    • Genome references
    • Standards and guidelines
    • Ontologies
    • File formats
    • Software tools
    • Pipelines
    • Release policy
    • Data access
    • Schemas
    • Getting started
    • Tutorials
    • REST API
    • Cart
    • Project overview
    • Acknowledgements
    • Contact
    • News
    • Citing ENCODE

Experiment matrix

Enter search terms to filter the experiments included in the matrix.

Assay
  • ChIP-seq
    58
  • shRNA RNA-seq
    24
  • microRNA-seq
    20
  • microRNA counts
    7
  • total RNA-seq
    1
Assay category
  • Transcription
    24
Target of assay
  • RNA binding protein
    22
  • control
    2
  • transcription factor
    2
Date released
  • August, 2015
    88
  • October, 2014
    85
  • December, 2014
    78
  • March, 2016
    64
  • November, 2014
    57
  • September, 2016
    32
  • June, 2016
    29
  • June, 2014
    25
  • February, 2016
    24
  • January, 2016
    24
  • January, 2017
    17
  • December, 2017
    7
  • August, 2016
    3
Available data
  • bam
    24
  • bigWig
    24
  • fastq
    24
  • tsv
    24
  • tar
    22
Experiment status
  • released
    24
Organism
  • Homo sapiens
    24
Biosample type
  • cell line
    24
Organ
  • blood
    24
  • bodily fluid
    24
Cell
  • cancer cell
    24
Project
  • ENCODE
    24
Genome assembly
  • GRCh38
    24
  • hg19
    24
Lab
  • Brenton Graveley, UConn
    24
BIOSAMPLE
ASSAY

24 results

Clear Filters
shRNA RNA-seq
cell line
K56224
  • Citing ENCODE
  • Privacy
  • Contact
  • Submitter sign-in
  • ENCODE
  • Stanford University

©2019 Stanford University