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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 7758ChIP-seq
  • 811DNase-seq
  • 724polyA mRNA RNA-seq
  • 526shRNA RNA-seq
  • 498total RNA-seq
  • 321eCLIP
  • 292RNA microarray
  • 259DNAme array
  • 219RRBS
  • 217WGBS
  • 211small RNA-seq
  • 170microRNA-seq
  • 159RNA Bind-n-Seq
  • 155RAMPAGE
  • 142genotyping array
  • 121CAGE
  • 117ATAC-seq
  • 115microRNA counts
  • 112single cell RNA-seq
  • 109siRNA RNA-seq
  • 90Repli-seq
  • 73RIP-seq
  • 67MRE-seq
  • 63Repli-chip
  • 55MeDIP-seq
  • 40genetic modification DNase-seq
  • 39ChIA-PET
  • 37FAIRE-seq
  • 34PAS-seq
  • 32RIP-chip
  • 32polyA depleted RNA-seq
  • 31RNA-PET
  • 27CRISPR RNA-seq
  • 27genotyping HTS
  • 19Hi-C
  • 14MS-MS
  • 135C
  • 8TAB-seq
  • 7iCLIP
  • 6DNA-PET
  • 25' RLM RACE
  • 2MNase-seq
  • 2Switchgear
Assay category
  • 115Transcription
Date released
  • 30March, 2016
  • 24January, 2017
  • 16November, 2015
  • 15February, 2016
  • 11July, 2016
  • 7January, 2016
  • 6August, 2016
  • 5December, 2015
  • 1February, 2017
Available data
  • 115bed bed6+
  • 115bigBed bed6+
  • 115rcc
Organism
  • 77Mus musculus
  • 38Homo sapiens
Biosample type
  • 101tissue
  • 5immortalized cell line
  • 5in vitro differentiated cells
  • 2primary cell
  • 1induced pluripotent stem cell line
  • 1stem cell
Organ
  • 24brain
  • 12embryonic structure
  • 12heart
  • 9liver
  • 4intestine
  • 4kidney
  • 4lung
  • 4stomach
  • 3gonad
  • 3muscle organ
  • 3skin of body
  • 2adrenal gland
  • 2pancreas
  • 2prostate gland
  • 2testis
  • 2thyroid gland
  • 2uterus
  • 2vagina
  • 1blood vessel
  • 1connective tissue
  • 1ovary
  • 1spleen
  • 1thymus
  • 1urinary bladder
  • 1vein
Project
  • 115ENCODE
Genome assembly (visualization)
  • 77mm10
  • 38GRCh38
BIOSAMPLE
ASSAY

115 results

search-icontable-tab-icon
Clear Filters
microRNA counts
tissue
forebrain8
heart8
hindbrain8
midbrain8
liver7
immortalized cell line
GM128781
HCT1161
HepG21
K5621
MCF-71
in vitro differentiated cells
bipolar neuron1
hepatocyte1
myocyte1
neural progenitor cell1
smooth muscle cell1
primary cell
endothelial cell of umbilical vein1
fibroblast of arm1
induced pluripotent stem cell line
induced pluripotent stem cell1
stem cell
H1-hESC1
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