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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 7758ChIP-seq
  • 811DNase-seq
  • 724polyA mRNA RNA-seq
  • 526shRNA RNA-seq
  • 498total RNA-seq
  • 321eCLIP
  • 292RNA microarray
  • 259DNAme array
  • 219RRBS
  • 217WGBS
  • 211small RNA-seq
  • 170microRNA-seq
  • 159RNA Bind-n-Seq
  • 155RAMPAGE
  • 142genotyping array
  • 121CAGE
  • 117ATAC-seq
  • 115microRNA counts
  • 112single cell RNA-seq
  • 109siRNA RNA-seq
  • 90Repli-seq
  • 73RIP-seq
  • 67MRE-seq
  • 63Repli-chip
  • 55MeDIP-seq
  • 40genetic modification DNase-seq
  • 39ChIA-PET
  • 37FAIRE-seq
  • 34PAS-seq
  • 32RIP-chip
  • 32polyA depleted RNA-seq
  • 31RNA-PET
  • 27CRISPR RNA-seq
  • 27genotyping HTS
  • 19Hi-C
  • 14MS-MS
  • 135C
  • 8TAB-seq
  • 7iCLIP
  • 6DNA-PET
  • 25' RLM RACE
  • 2MNase-seq
  • 2Switchgear
Assay category
  • 142Genotyping
Date released
  • 64August, 2011
  • 59August, 2016
  • 19July, 2013
Available data
  • 64bed bedLogR
  • 63bigBed bedLogR
  • 59idat
Organism
  • 142Homo sapiens
Biosample type
  • 62immortalized cell line
  • 54primary cell
  • 16tissue
  • 4in vitro differentiated cells
  • 4stem cell
  • 2induced pluripotent stem cell line
Organ
  • 11connective tissue
  • 8kidney
  • 8skin of body
  • 7intestine
  • 4eye
  • 4large intestine
  • 4lung
  • 4muscle organ
  • 3liver
  • 3mammary gland
  • 3penis
  • 3small intestine
  • 2blood vessel
  • 2brain
  • 2bronchus
  • 2extraembryonic component
  • 2mouth
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1heart
  • 1ovary
  • 1prostate gland
  • 1stomach
  • 1vein
Project
  • 123ENCODE
  • 19Roadmap
Genome assembly (visualization)
  • 63hg19
Audit category:
  • 55unreplicated experiment
BIOSAMPLE
ASSAY

142 results

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Clear Filters
genotyping array
immortalized cell line
MCF 10A3
Panc13
A5492
CMK2
GM128782
primary cell
IMR-903
astrocyte3
mammary epithelial cell3
skeletal muscle myoblast3
CD14-positive monocyte2
tissue
transverse colon4
liver3
small intestine2
adrenal gland1
chorion1
in vitro differentiated cells
myotube3
smooth muscle cell1
stem cell
H1-hESC2
H7-hESC1
H91
induced pluripotent stem cell line
iPS DF 19.111
iPS DF 6.91
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