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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7758
ChIP-seq
811
DNase-seq
724
polyA mRNA RNA-seq
526
shRNA RNA-seq
498
total RNA-seq
321
eCLIP
292
RNA microarray
259
DNAme array
219
RRBS
217
WGBS
211
small RNA-seq
170
microRNA-seq
159
RNA Bind-n-Seq
155
RAMPAGE
142
genotyping array
121
CAGE
117
ATAC-seq
115
microRNA counts
112
single cell RNA-seq
109
siRNA RNA-seq
90
Repli-seq
73
RIP-seq
67
MRE-seq
63
Repli-chip
55
MeDIP-seq
40
genetic modification DNase-seq
39
ChIA-PET
37
FAIRE-seq
34
PAS-seq
32
RIP-chip
32
polyA depleted RNA-seq
31
RNA-PET
27
CRISPR RNA-seq
27
genotyping HTS
19
Hi-C
14
MS-MS
13
5C
8
TAB-seq
7
iCLIP
6
DNA-PET
2
5' RLM RACE
2
MNase-seq
2
Switchgear
Assay category
90
Replication timing
Date released
90
February, 2012
Available data
90
bam
90
bigWig
90
fastq
Organism
90
Homo sapiens
Biosample type
60
immortalized cell line
24
primary cell
6
stem cell
Organ
12
skin of body
6
blood vessel
6
connective tissue
6
penis
6
vein
Project
90
ENCODE
Genome assembly (visualization)
90
hg19
BIOSAMPLE
ASSAY
90 results
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Repli-seq
immortalized cell line
GM06990
6
GM12801
6
GM12812
6
GM12813
6
GM12878
6
+ See 5 more…
primary cell
IMR-90
6
endothelial cell of umbilical vein
6
foreskin fibroblast
6
keratinocyte
6
stem cell
BG02ES
6
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