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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 7758ChIP-seq
  • 811DNase-seq
  • 724polyA mRNA RNA-seq
  • 526shRNA RNA-seq
  • 498total RNA-seq
  • 321eCLIP
  • 292RNA microarray
  • 259DNAme array
  • 219RRBS
  • 217WGBS
  • 211small RNA-seq
  • 170microRNA-seq
  • 159RNA Bind-n-Seq
  • 155RAMPAGE
  • 142genotyping array
  • 121CAGE
  • 117ATAC-seq
  • 115microRNA counts
  • 112single cell RNA-seq
  • 109siRNA RNA-seq
  • 90Repli-seq
  • 73RIP-seq
  • 67MRE-seq
  • 63Repli-chip
  • 55MeDIP-seq
  • 40genetic modification DNase-seq
  • 39ChIA-PET
  • 37FAIRE-seq
  • 34PAS-seq
  • 32RIP-chip
  • 32polyA depleted RNA-seq
  • 31RNA-PET
  • 27CRISPR RNA-seq
  • 27genotyping HTS
  • 19Hi-C
  • 14MS-MS
  • 135C
  • 8TAB-seq
  • 7iCLIP
  • 6DNA-PET
  • 25' RLM RACE
  • 2MNase-seq
  • 2Switchgear
Assay category
  • 67DNA methylation
  • 67DNA sequencing
Date released
  • 43July, 2013
  • 9April, 2011
  • 6March, 2011
  • 4August, 2011
  • 4May, 2014
  • 1October, 2010
Available data
  • 4bam
Organism
  • 65Homo sapiens
  • 2Mus musculus
Biosample type
  • 35primary cell
  • 11immortalized cell line
  • 8stem cell
  • 7in vitro differentiated cells
  • 6tissue
Organ
  • 10mammary gland
  • 9penis
  • 7embryonic structure
  • 6skin of body
  • 3blood
  • 3brain
  • 3connective tissue
  • 3liver
Project
  • 43Roadmap
  • 24ENCODE
Audit category:
  • 2missing documents
BIOSAMPLE
ASSAY

67 results

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Clear Filters
MRE-seq
primary cell
luminal epithelial cell of mammary gland5
myoepithelial cell of mammary gland4
CD4-positive helper T cell3
CD4-positive, alpha-beta memory T cell3
CD8-positive, alpha-beta T cell3
immortalized cell line
GM128782
K5622
CH12.LX1
GM128911
GM128921
stem cell
mammary stem cell4
H1-hESC2
BG02ES1
H91
in vitro differentiated cells
endodermal cell7
tissue
brain3
liver3
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