Summary for ENCSR300VIY
Summary
- Status
- released
- Description
- This set represents the constituent input control libraries sequenced on HiSeq 4000 platform from which a pooled and subsampled control is derived from for the processing of the ChIP-seq experiments done on eGFP-tagged zinc fingers in the HEK293 cell line
- Donor diversity
- single
- Assay
- ChIP-seq
- Biosample summary
- HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens SP7, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZEB2, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF18, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZSCAN5A, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZFP62, genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCF
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- J. Michael Cherry, Stanford
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- Aliases
- michael-snyder:HEK_ZNF_HiSeq4000_control_pool
- External resources
- None submitted
Experiments in ENCSR300VIY
Experiments
6 experiments
Accession | Assay | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR429LAP | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens SP7 | Michael Snyder, Stanford | released | |
| ENCSR274OGE | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCF | Michael Snyder, Stanford | released | |
| ENCSR342AGU | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZSCAN5A | Michael Snyder, Stanford | released | |
| ENCSR688NWK | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZFP62 | Michael Snyder, Stanford | released | |
| ENCSR354FNX | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF18 | Michael Snyder, Stanford | released | |
| ENCSR157LMX | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZEB2 | Michael Snyder, Stanford | released |