Summary for ENCSR529DLA

doi:10.17989/ENCSR529DLA

Summary

Status
released
Donor diversity
single
Assay
ChIP-seq
Target
CTCF
Biosample summary
HCT116 cell line treated with 5-Phenyl-1H-indole-3-acetic acid genetically modified (insertion) using CRISPR targeting H. sapiens CTCF, genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696
Diseases
Not reported
Treatments
5-Phenyl-1H-indole-3-acetic acid

Attribution

ENCODE4 project
Lab
ENCODE Consortium
Award
U24HG009397 (J. Michael Cherry, Stanford)
Project
ENCODE
Aliases
encode:TF-ChIP_CTCF-tag
External resources
None submitted
Tags
Search for all GeneSilencingSeries with internal tag Degron

Experiments in ENCSR529DLA

Experiments
2 experiments
Accession
Biosample summary
Lab
Status
Cart
ENCSR160GVOHomo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens CTCF treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hoursBradley Bernstein, Broad
released
ENCSR059BCOHomo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens CTCFBradley Bernstein, Broad
released
Control experiments
2 control experiments
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR862XXVinput libraryHomo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens CTCF treated with 1 μM 5-Phenyl-1H-indole-3-acetic acid for 6 hoursBradley Bernstein, Broad
released
ENCSR229ZIRinput libraryHomo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens CTCFBradley Bernstein, Broad
released