File summary for ENCFF840JDP (fastq)
Summary
- Status
- released
- Dataset
- ENCSR685OFR
- File format
- fastq
- Output type
- reads
- Biological replicate(s)
- [2]
- Technical replicate(s)
- [2_1]
- MD5sum
- 270d7eb95c0619fa7939e6b65d86a19f
- Content MD5sum
- 29f438a0d079d06d949899e76c0935e0
- Read count
- 43258255
- Read length
- 100
- File size
- 2.17 GB
Attribution
ENCODE4 project
- Lab
- Michael Snyder, Stanford
- Award PI
- Michael Snyder, Stanford
- Submitted by
- Tao Wang
- Project
- ENCODE
- Date added
- 2021-08-25
- External resources
- Aliases
- michael-snyder:SREQ-381-6-TAGGCATG_S6_L001_R1_001.fastq.gz
- Original file name
- /oak/stanford/scg/prj_ENCODE/SREQ/381/SREQ-381-6-TAGGCATG_S6_L001_R1_001.fastq.gz
Sequencing file information
- Platform
- Illumina NovaSeq 6000
- Flowcell
- :::TAGGCATG
- Fastq flowcell signature
- HG22NDRXY:1:1:AAGGCATG:, HG22NDRXY:1:1:CAGGCATG:, HG22NDRXY:1:1:GAGGCATG:, HG22NDRXY:1:1:NAGGCATG:, HG22NDRXY:1:1:TAAGCATG:, HG22NDRXY:1:1:TACGCATG:, HG22NDRXY:1:1:TAGACATG:, HG22NDRXY:1:1:TAGCCATG:, HG22NDRXY:1:1:TAGGAATG:, HG22NDRXY:1:1:TAGGCAAG:, HG22NDRXY:1:1:TAGGCACG:, HG22NDRXY:1:1:TAGGCAGG:, HG22NDRXY:1:1:TAGGCATA:, HG22NDRXY:1:1:TAGGCATC:, HG22NDRXY:1:1:TAGGCATG:, HG22NDRXY:1:1:TAGGCATT:, HG22NDRXY:1:1:TAGGCCTG:, HG22NDRXY:1:1:TAGGCGTG:, HG22NDRXY:1:1:TAGGCTTG:, HG22NDRXY:1:1:TAGGGATG:, HG22NDRXY:1:1:TAGGNATG:, HG22NDRXY:1:1:TAGGTATG:, HG22NDRXY:1:1:TAGTCATG:, HG22NDRXY:1:1:TATGCATG:, HG22NDRXY:1:1:TCGGCATG:, HG22NDRXY:1:1:TGGGCATG:, HG22NDRXY:1:1:TNGGCATG:, HG22NDRXY:1:1:TTGGCATG:
- Run type
- paired-ended 100nt
- Read
- 1 paired with ENCFF957VLR