File summary for ENCFF538PHT (fastq)
Summary
- Status
- released
- Dataset
- ENCSR685OFR
- File format
- fastq
- Output type
- reads
- Biological replicate(s)
- [1]
- Technical replicate(s)
- [1_1]
- MD5sum
- b3c0d82697d494660e75e3c4d56f1190
- Content MD5sum
- 9884946e1a5dfbeb388236a2ec336c2c
- Read count
- 46897444
- Read length
- 100
- File size
- 2.38 GB
Attribution
ENCODE4 project
- Lab
- Michael Snyder, Stanford
- Award PI
- Michael Snyder, Stanford
- Submitted by
- Tao Wang
- Project
- ENCODE
- Date added
- 2021-08-25
- External resources
- Aliases
- michael-snyder:SREQ-381-5-GGACTCCT_S5_L001_R2_001.fastq.gz
- Original file name
- /oak/stanford/scg/prj_ENCODE/SREQ/381/SREQ-381-5-GGACTCCT_S5_L001_R2_001.fastq.gz
Sequencing file information
- Platform
- Illumina NovaSeq 6000
- Flowcell
- :::GGACTCCT
- Fastq flowcell signature
- HG22NDRXY:1:2:AGACTCCT:, HG22NDRXY:1:2:CGACTCCT:, HG22NDRXY:1:2:GAACTCCT:, HG22NDRXY:1:2:GCACTCCT:, HG22NDRXY:1:2:GGAATCCT:, HG22NDRXY:1:2:GGACACCT:, HG22NDRXY:1:2:GGACCCCT:, HG22NDRXY:1:2:GGACGCCT:, HG22NDRXY:1:2:GGACNCCT:, HG22NDRXY:1:2:GGACTACT:, HG22NDRXY:1:2:GGACTCAT:, HG22NDRXY:1:2:GGACTCCA:, HG22NDRXY:1:2:GGACTCCC:, HG22NDRXY:1:2:GGACTCCG:, HG22NDRXY:1:2:GGACTCCT:, HG22NDRXY:1:2:GGACTCGT:, HG22NDRXY:1:2:GGACTCTT:, HG22NDRXY:1:2:GGACTGCT:, HG22NDRXY:1:2:GGACTTCT:, HG22NDRXY:1:2:GGAGTCCT:, HG22NDRXY:1:2:GGATTCCT:, HG22NDRXY:1:2:GGCCTCCT:, HG22NDRXY:1:2:GGGCTCCT:, HG22NDRXY:1:2:GGTCTCCT:, HG22NDRXY:1:2:GNACTCCT:, HG22NDRXY:1:2:GTACTCCT:, HG22NDRXY:1:2:NGACTCCT:, HG22NDRXY:1:2:TGACTCCT:
- Run type
- paired-ended 100nt
- Read
- 2 paired with ENCFF154DAA