File summary for ENCFF106PXX (fastq)
Summary
- Status
- released
- Dataset
- ENCSR379NMT
- File format
- fastq
- Output type
- reads
- Biological replicate(s)
- [2]
- Technical replicate(s)
- [2_1]
- MD5sum
- 23eac980050a0c52822cb0fc92805f73
- Content MD5sum
- d17708c1a8a9404918ced9981e940a86
- Read count
- 47569959
- Read length
- 100
- File size
- 2.45 GB
Attribution
ENCODE4 project
- Lab
- Michael Snyder, Stanford
- Award PI
- Michael Snyder, Stanford
- Submitted by
- Tao Wang
- Project
- ENCODE
- Date added
- 2021-08-25
- External resources
- Aliases
- michael-snyder:SREQ-415-5-GGACTCCT_S5_L002_R2_001.fastq.gz
- Original file name
- /oak/stanford/scg/prj_ENCODE/SREQ/415/SREQ-415-5-GGACTCCT_S5_L002_R2_001.fastq.gz
Sequencing file information
- Platform
- Illumina NovaSeq 6000
- Flowcell
- :::GGACTCCT
- Fastq flowcell signature
- HG22NDRXY:2:2:AGACTCCT:, HG22NDRXY:2:2:CGACTCCT:, HG22NDRXY:2:2:GAACTCCT:, HG22NDRXY:2:2:GCACTCCT:, HG22NDRXY:2:2:GGAATCCT:, HG22NDRXY:2:2:GGACACCT:, HG22NDRXY:2:2:GGACCCCT:, HG22NDRXY:2:2:GGACGCCT:, HG22NDRXY:2:2:GGACNCCT:, HG22NDRXY:2:2:GGACTACT:, HG22NDRXY:2:2:GGACTCAT:, HG22NDRXY:2:2:GGACTCCA:, HG22NDRXY:2:2:GGACTCCC:, HG22NDRXY:2:2:GGACTCCG:, HG22NDRXY:2:2:GGACTCCN:, HG22NDRXY:2:2:GGACTCCT:, HG22NDRXY:2:2:GGACTCGT:, HG22NDRXY:2:2:GGACTCNT:, HG22NDRXY:2:2:GGACTCTT:, HG22NDRXY:2:2:GGACTGCT:, HG22NDRXY:2:2:GGACTTCT:, HG22NDRXY:2:2:GGAGTCCT:, HG22NDRXY:2:2:GGATTCCT:, HG22NDRXY:2:2:GGCCTCCT:, HG22NDRXY:2:2:GGGCTCCT:, HG22NDRXY:2:2:GGTCTCCT:, HG22NDRXY:2:2:GNACTCCT:, HG22NDRXY:2:2:GTACTCCT:, HG22NDRXY:2:2:NGACTCCT:, HG22NDRXY:2:2:TGACTCCT:
- Run type
- paired-ended 100nt
- Read
- 2 paired with ENCFF906WNV