Experiment summary for ENCSR993XPD
doi:10.17989/ENCSR993XPD
Summary
- Status
- released
- Assay
- whole-genome shotgun bisulfite sequencing (WGBS)
- Biosample summary
- Mus musculus strain B6NCrl embryonic facial prominence tissue embryo (10.5 days)
- Biosample Type
- tissue
- Replication type
- isogenic
- Description
- Whole genome bisulfite-seq on embryonic 10.5 day mouse embryonic facial prominence
- Nucleic acid type
- DNA
- Size range
- 180-500
- Lysis method
- QIAGEN DNeasy Blood & Tissue Kit
- Fragmentation methods
- shearing (Covaris S2)
- Size selection method
- Sera-mag SpeedBeads
- Platform
- Illumina HiSeq 2500
Attribution
ENCODE3 project
- Lab
- Joe Ecker, Salk
- Award
- U54HG006997 (Bing Ren, UCSD)
- Project
- ENCODE
- External resources
- Aliases
- joe-ecker:E10_5_CF
- Date submitted
- October 17, 2016
- Date released
- October 28, 2016
- Reference Epigenome
- ENCSR349UOB
- Organism Development Series
- ENCSR008CAN
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Mus musculus strain B6NCrl mixed sex embryo (10.5 days) embryonic facial prominence tissue | ENCBS938XWJ | ENCLB408PAW |
1 | 2 | Mus musculus strain B6NCrl mixed sex embryo (10.5 days) embryonic facial prominence tissue | ENCBS938XWJ | ENCLB967XOG |
2 | 1 | Mus musculus strain B6NCrl mixed sex embryo (10.5 days) embryonic facial prominence tissue | ENCBS199YOQ | ENCLB353APJ |
2 | 2 | Mus musculus strain B6NCrl mixed sex embryo (10.5 days) embryonic facial prominence tissue | ENCBS199YOQ | ENCLB249RES |