Experiment summary for ENCSR993GFS

doi:10.17989/ENCSR993GFS

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
cebp-1
Biosample summary
Caenorhabditis elegans strain OP563 (unc-119(tm4063) III; wgIs563) whole organism young adult 63 hours post synchronization at L1 larva starved after bleaching stage genetically modified (insertion) using bombardment targeting celegans cebp-1
Biosample Type
whole organisms
Replication type
isogenic
Description
ChIP-seq of transgenic worms expressing CEBP-1-eGFP fusion proteins. The IP was performed using an anti-GFP antibody.
Nucleic acid type
DNA
Fragmentation methods
sonication (generic microtip)
Size selection method
SPRI beads
Controls

Attribution

modERN project
Lab
Valerie Reinke, Yale
Award
U41HG007355 (Robert Waterston, UW)
Project
modERN
Aliases
kevin-white:CEBP-1-OP563-yAd
Date submitted
October 5, 2017
Date released
November 6, 2017

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
31strain OP563 (unc-119(tm4063) III; wgIs563) mixed sex young adult 63 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting celegans cebp-1ENCBS243CXVENCGM995IWRENCAB728YTOENCLB831PEP
71strain OP563 (unc-119(tm4063) III; wgIs563) mixed sex young adult 63 hours post synchronization at L1 larva starved after bleaching stage whole organism genetically modified (insertion) using bombardment targeting celegans cebp-1ENCBS857GRBENCGM995IWRENCAB728YTOENCLB579KGX