Experiment summary for ENCSR989NEA
doi:10.17989/ENCSR989NEA
Summary
- Status
- released
- Assay
- siRNA knockdown followed by RNA-seq (siRNA RNA-seq)
- Target
- TBL1XR1
- Biosample summary
- Homo sapiens K562 expressing RNAi targeting H. sapiens TBL1XR1
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- RNA-seq on K562 cells treated with siRNA targeting TBL1XR1.
- Nucleic acid type
- RNA
- Size range
- >200
- Strand specificity
- unstranded
- Platform
- Illumina HiSeq 2000
- Controls
Attribution
ENCODE3 project
- Lab
- Michael Snyder, Stanford
- Award
- U54HG006996 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Aliases
- sherman-weissman:E-K562-TBL1XR1
- Date submitted
- August 1, 2016
- Date released
- October 9, 2016
- Gene Silencing Series
- ENCSR384QGF
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens K562 cell line expressing RNAi targeting H. sapiens TBL1XR1 | ENCBS701EZF | ENCGM652QLW | ENCLB690PKX |
| 2 | 1 | Homo sapiens K562 cell line expressing RNAi targeting H. sapiens TBL1XR1 | ENCBS699RAH | ENCGM652QLW | ENCLB543LRW |