Experiment summary for ENCSR984HFU

doi:10.17989/ENCSR984HFU

Summary

Status
released
Assay
ATAC-seq
Biosample summary
Mus musculus strain C57BL/6J dendritic cell originated from whole organism treated with lipopolysaccharide
Biosample Type
in vitro differentiated cells
Replication type
isogenic
Description
ATAC-seq
Treatments
lipopolysaccharide (CHEBI:16412)
Nucleic acid type
DNA
Size range
175-500
Extraction method
ATAC-seq (Greenleaf & Chang Lab protocol)

Attribution

Genomics of Gene Regulation Project
Lab
Manuel Garber, UMass
Award
U01HG007910 (Jeremy Luban, UMass)
Project
GGR
External resources
Aliases
manuel-garber:M02_BMDC_ATAC_Ctrl_0h_ATAC-seq
Date submitted
January 18, 2017
Date released
January 19, 2017
Annotation (gkmsvm-model)

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Mus musculus strain C57BL/6J dendritic in vitro differentiated cells originated from whole organism treated with lipopolysaccharideENCBS445ZSRENCLB676XDS
21Mus musculus strain C57BL/6J dendritic in vitro differentiated cells originated from whole organism treated with lipopolysaccharideENCBS087APKENCLB409HKJ